Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.7■□□□□ 0.58
Atg4bQ8BGE6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
Atg4bQ8BGE6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
Atg4bQ8BGE6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Atg4bQ8BGE6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4bQ8BGE6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4bQ8BGE6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atg4bQ8BGE6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Atg4bQ8BGE6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg4bQ8BGE6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.68■□□□□ 0.58
Atg4bQ8BGE6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Atg4bQ8BGE6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4bQ8BGE6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4bQ8BGE6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4bQ8BGE6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4bQ8BGE6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Atg4bQ8BGE6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4bQ8BGE6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4bQ8BGE6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg4bQ8BGE6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Atg4bQ8BGE6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Notumos-201ENSMUST00000151998 2659 ntBASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Gm43137-201ENSMUST00000198052 594 ntBASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.64■□□□□ 0.57
Atg4bQ8BGE6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.63■□□□□ 0.57
Atg4bQ8BGE6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4bQ8BGE6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Atg4bQ8BGE6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Atg4bQ8BGE6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4bQ8BGE6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4bQ8BGE6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.62■□□□□ 0.57
Atg4bQ8BGE6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4bQ8BGE6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms