Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ubp1Q811S7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ubp1Q811S7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.5■□□□□ 0.71
Ubp1Q811S7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubp1Q811S7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ubp1Q811S7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ubp1Q811S7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Gm45417-201ENSMUST00000209533 758 ntBASIC19.49■□□□□ 0.71
Ubp1Q811S7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.49■□□□□ 0.71
Ubp1Q811S7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.49■□□□□ 0.71
Ubp1Q811S7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubp1Q811S7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubp1Q811S7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubp1Q811S7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubp1Q811S7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubp1Q811S7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.48■□□□□ 0.71
Ubp1Q811S7 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.48■□□□□ 0.71
Ubp1Q811S7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.48■□□□□ 0.71
Ubp1Q811S7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubp1Q811S7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ubp1Q811S7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ubp1Q811S7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubp1Q811S7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ubp1Q811S7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ubp1Q811S7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubp1Q811S7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubp1Q811S7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubp1Q811S7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.47■□□□□ 0.71
Ubp1Q811S7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubp1Q811S7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubp1Q811S7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubp1Q811S7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubp1Q811S7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubp1Q811S7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubp1Q811S7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ubp1Q811S7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ubp1Q811S7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubp1Q811S7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ubp1Q811S7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubp1Q811S7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ubp1Q811S7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.44■□□□□ 0.7
Ubp1Q811S7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ubp1Q811S7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ubp1Q811S7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubp1Q811S7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubp1Q811S7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Ubp1Q811S7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Mir7075-201ENSMUST00000184187 82 ntBASIC19.42■□□□□ 0.7
Ubp1Q811S7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubp1Q811S7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubp1Q811S7 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms