Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atpaf1Q811I0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Rarb-207ENSMUST00000225921 2756 ntBASIC16.15■□□□□ 0.18
Atpaf1Q811I0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atpaf1Q811I0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Atpaf1Q811I0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Atpaf1Q811I0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atpaf1Q811I0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atpaf1Q811I0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atpaf1Q811I0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atpaf1Q811I0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atpaf1Q811I0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atpaf1Q811I0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atpaf1Q811I0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atpaf1Q811I0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atpaf1Q811I0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atpaf1Q811I0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atpaf1Q811I0 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.1■□□□□ 0.17
Atpaf1Q811I0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atpaf1Q811I0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms