Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Cldn34b3Q80ZS5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn34b3Q80ZS5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cldn34b3Q80ZS5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn34b3Q80ZS5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn34b3Q80ZS5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn34b3Q80ZS5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn34b3Q80ZS5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn34b3Q80ZS5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Cldn34b3Q80ZS5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.44■□□□□ 0.54
Cldn34b3Q80ZS5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cldn34b3Q80ZS5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn34b3Q80ZS5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn34b3Q80ZS5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cldn34b3Q80ZS5 Gm21956-201ENSMUST00000179946 522 ntBASIC18.43■□□□□ 0.54
Cldn34b3Q80ZS5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.43■□□□□ 0.54
Cldn34b3Q80ZS5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn34b3Q80ZS5 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.43■□□□□ 0.54
Cldn34b3Q80ZS5 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.43■□□□□ 0.54
Cldn34b3Q80ZS5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.43■□□□□ 0.54
Cldn34b3Q80ZS5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn34b3Q80ZS5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn34b3Q80ZS5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn34b3Q80ZS5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn34b3Q80ZS5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn34b3Q80ZS5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn34b3Q80ZS5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn34b3Q80ZS5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn34b3Q80ZS5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn34b3Q80ZS5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
Cldn34b3Q80ZS5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn34b3Q80ZS5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cldn34b3Q80ZS5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cldn34b3Q80ZS5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn34b3Q80ZS5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn34b3Q80ZS5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms