Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nucks1Q80XU3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nucks1Q80XU3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nucks1Q80XU3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.18■□□□□ 0.98
Nucks1Q80XU3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nucks1Q80XU3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nucks1Q80XU3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nucks1Q80XU3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nucks1Q80XU3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nucks1Q80XU3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nucks1Q80XU3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.16■□□□□ 0.98
Nucks1Q80XU3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nucks1Q80XU3 Gm9959-201ENSMUST00000068277 390 ntBASIC21.16■□□□□ 0.98
Nucks1Q80XU3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nucks1Q80XU3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nucks1Q80XU3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nucks1Q80XU3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Golph3-202ENSMUST00000226517 2359 ntBASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nucks1Q80XU3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Nucks1Q80XU3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.14■□□□□ 0.97
Nucks1Q80XU3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nucks1Q80XU3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nucks1Q80XU3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nucks1Q80XU3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nucks1Q80XU3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nucks1Q80XU3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nucks1Q80XU3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nucks1Q80XU3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nucks1Q80XU3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nucks1Q80XU3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Nucks1Q80XU3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.13■□□□□ 0.97
Nucks1Q80XU3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.13■□□□□ 0.97
Nucks1Q80XU3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nucks1Q80XU3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nucks1Q80XU3 Gm22238-201ENSMUST00000175222 88 ntBASIC21.12■□□□□ 0.97
Nucks1Q80XU3 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.12■□□□□ 0.97
Nucks1Q80XU3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nucks1Q80XU3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nucks1Q80XU3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.1■□□□□ 0.97
Nucks1Q80XU3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nucks1Q80XU3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nucks1Q80XU3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.09■□□□□ 0.97
Nucks1Q80XU3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.09■□□□□ 0.97
Nucks1Q80XU3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nucks1Q80XU3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nucks1Q80XU3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nucks1Q80XU3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nucks1Q80XU3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nucks1Q80XU3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms