Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Vrk1Q80X41 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Gm42778-201ENSMUST00000199644 553 ntBASIC18.93■□□□□ 0.62
Vrk1Q80X41 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.93■□□□□ 0.62
Vrk1Q80X41 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.92■□□□□ 0.62
Vrk1Q80X41 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vrk1Q80X41 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vrk1Q80X41 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vrk1Q80X41 AV356131-201ENSMUST00000206201 750 ntBASIC18.92■□□□□ 0.62
Vrk1Q80X41 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vrk1Q80X41 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vrk1Q80X41 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vrk1Q80X41 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vrk1Q80X41 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vrk1Q80X41 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vrk1Q80X41 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vrk1Q80X41 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Vrk1Q80X41 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Vrk1Q80X41 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Vrk1Q80X41 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.91■□□□□ 0.62
Vrk1Q80X41 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vrk1Q80X41 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.91■□□□□ 0.62
Vrk1Q80X41 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vrk1Q80X41 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Vrk1Q80X41 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vrk1Q80X41 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vrk1Q80X41 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Vrk1Q80X41 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.9■□□□□ 0.62
Vrk1Q80X41 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vrk1Q80X41 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.9■□□□□ 0.62
Vrk1Q80X41 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Vrk1Q80X41 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vrk1Q80X41 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vrk1Q80X41 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Vrk1Q80X41 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vrk1Q80X41 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Vrk1Q80X41 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vrk1Q80X41 Notumos-201ENSMUST00000151998 2659 ntBASIC18.89■□□□□ 0.61
Vrk1Q80X41 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vrk1Q80X41 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vrk1Q80X41 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vrk1Q80X41 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vrk1Q80X41 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
Vrk1Q80X41 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vrk1Q80X41 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Vrk1Q80X41 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.87■□□□□ 0.61
Vrk1Q80X41 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vrk1Q80X41 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.87■□□□□ 0.61
Vrk1Q80X41 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.87■□□□□ 0.61
Vrk1Q80X41 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vrk1Q80X41 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vrk1Q80X41 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vrk1Q80X41 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vrk1Q80X41 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vrk1Q80X41 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vrk1Q80X41 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vrk1Q80X41 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vrk1Q80X41 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vrk1Q80X41 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Vrk1Q80X41 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.86■□□□□ 0.61
Vrk1Q80X41 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vrk1Q80X41 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vrk1Q80X41 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vrk1Q80X41 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vrk1Q80X41 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.85■□□□□ 0.61
Vrk1Q80X41 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Vrk1Q80X41 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms