Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Otop1Q80VM9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Otop1Q80VM9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.04■□□□□ 0.64
Otop1Q80VM9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.04■□□□□ 0.64
Otop1Q80VM9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Otop1Q80VM9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Otop1Q80VM9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Otop1Q80VM9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Otop1Q80VM9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
Otop1Q80VM9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Otop1Q80VM9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Otop1Q80VM9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Otop1Q80VM9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Otop1Q80VM9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Otop1Q80VM9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Otop1Q80VM9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Otop1Q80VM9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Otop1Q80VM9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Otop1Q80VM9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Otop1Q80VM9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Otop1Q80VM9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Otop1Q80VM9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Otop1Q80VM9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Otop1Q80VM9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.02■□□□□ 0.64
Otop1Q80VM9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.02■□□□□ 0.64
Otop1Q80VM9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Otop1Q80VM9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.02■□□□□ 0.64
Otop1Q80VM9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Otop1Q80VM9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Otop1Q80VM9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Otop1Q80VM9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Otop1Q80VM9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Otop1Q80VM9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Otop1Q80VM9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Otop1Q80VM9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.01■□□□□ 0.63
Otop1Q80VM9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Otop1Q80VM9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Otop1Q80VM9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Otop1Q80VM9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Otop1Q80VM9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Otop1Q80VM9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Otop1Q80VM9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19■□□□□ 0.63
Otop1Q80VM9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Otop1Q80VM9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19■□□□□ 0.63
Otop1Q80VM9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19■□□□□ 0.63
Otop1Q80VM9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19■□□□□ 0.63
Otop1Q80VM9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19■□□□□ 0.63
Otop1Q80VM9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Otop1Q80VM9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19■□□□□ 0.63
Otop1Q80VM9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Otop1Q80VM9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19■□□□□ 0.63
Otop1Q80VM9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19■□□□□ 0.63
Otop1Q80VM9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Otop1Q80VM9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19■□□□□ 0.63
Otop1Q80VM9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Otop1Q80VM9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Otop1Q80VM9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.99■□□□□ 0.63
Otop1Q80VM9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Otop1Q80VM9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Otop1Q80VM9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Otop1Q80VM9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Otop1Q80VM9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Otop1Q80VM9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Otop1Q80VM9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Otop1Q80VM9 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.98■□□□□ 0.63
Otop1Q80VM9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Otop1Q80VM9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Otop1Q80VM9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.98■□□□□ 0.63
Otop1Q80VM9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Otop1Q80VM9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Otop1Q80VM9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Otop1Q80VM9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Otop1Q80VM9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Otop1Q80VM9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Otop1Q80VM9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.97■□□□□ 0.63
Otop1Q80VM9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Otop1Q80VM9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Otop1Q80VM9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Otop1Q80VM9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.97■□□□□ 0.63
Otop1Q80VM9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Otop1Q80VM9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Otop1Q80VM9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Otop1Q80VM9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.96■□□□□ 0.63
Otop1Q80VM9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Otop1Q80VM9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Otop1Q80VM9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Otop1Q80VM9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Otop1Q80VM9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.96■□□□□ 0.63
Otop1Q80VM9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Otop1Q80VM9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Otop1Q80VM9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.96■□□□□ 0.63
Otop1Q80VM9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Otop1Q80VM9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Otop1Q80VM9 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.96■□□□□ 0.63
Otop1Q80VM9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Otop1Q80VM9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Otop1Q80VM9 Gm13234-201ENSMUST00000120010 747 ntBASIC18.95■□□□□ 0.62
Otop1Q80VM9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Otop1Q80VM9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.95■□□□□ 0.62
Otop1Q80VM9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms