Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf38bQ80SY5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Prpf38bQ80SY5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf38bQ80SY5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf38bQ80SY5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.64■□□□□ 0.89
Prpf38bQ80SY5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf38bQ80SY5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf38bQ80SY5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Prpf38bQ80SY5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Prpf38bQ80SY5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf38bQ80SY5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf38bQ80SY5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Prpf38bQ80SY5 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.62■□□□□ 0.89
Prpf38bQ80SY5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Prpf38bQ80SY5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38bQ80SY5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.62■□□□□ 0.89
Prpf38bQ80SY5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.62■□□□□ 0.89
Prpf38bQ80SY5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.62■□□□□ 0.89
Prpf38bQ80SY5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.62■□□□□ 0.89
Prpf38bQ80SY5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf38bQ80SY5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38bQ80SY5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Prpf38bQ80SY5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38bQ80SY5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38bQ80SY5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Prpf38bQ80SY5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38bQ80SY5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf38bQ80SY5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38bQ80SY5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Prpf38bQ80SY5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38bQ80SY5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38bQ80SY5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38bQ80SY5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38bQ80SY5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Prpf38bQ80SY5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38bQ80SY5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Prpf38bQ80SY5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.59■□□□□ 0.89
Prpf38bQ80SY5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.59■□□□□ 0.89
Prpf38bQ80SY5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Prpf38bQ80SY5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38bQ80SY5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.59■□□□□ 0.89
Prpf38bQ80SY5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38bQ80SY5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38bQ80SY5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38bQ80SY5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38bQ80SY5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.58■□□□□ 0.89
Prpf38bQ80SY5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38bQ80SY5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.57■□□□□ 0.88
Prpf38bQ80SY5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38bQ80SY5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Prpf38bQ80SY5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38bQ80SY5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38bQ80SY5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Prpf38bQ80SY5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Prpf38bQ80SY5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38bQ80SY5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Prpf38bQ80SY5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.56■□□□□ 0.88
Prpf38bQ80SY5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38bQ80SY5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38bQ80SY5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.56■□□□□ 0.88
Prpf38bQ80SY5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38bQ80SY5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38bQ80SY5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38bQ80SY5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38bQ80SY5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.56■□□□□ 0.88
Prpf38bQ80SY5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.56■□□□□ 0.88
Prpf38bQ80SY5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 Gm42778-201ENSMUST00000199644 553 ntBASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 Gm40848-201ENSMUST00000221998 324 ntBASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Prpf38bQ80SY5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38bQ80SY5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Prpf38bQ80SY5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms