Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Exosc3Q7TQK4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Exosc3Q7TQK4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Exosc3Q7TQK4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Exosc3Q7TQK4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Exosc3Q7TQK4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Exosc3Q7TQK4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Exosc3Q7TQK4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Exosc3Q7TQK4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Exosc3Q7TQK4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Exosc3Q7TQK4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Spcs1-204ENSMUST00000226782 949 ntBASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Exosc3Q7TQK4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Notumos-201ENSMUST00000151998 2659 ntBASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Exosc3Q7TQK4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Gm12251-201ENSMUST00000117893 792 ntBASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Gm45417-201ENSMUST00000209533 758 ntBASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Exosc3Q7TQK4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 Mir7075-201ENSMUST00000184187 82 ntBASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Exosc3Q7TQK4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Exosc3Q7TQK4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Exosc3Q7TQK4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms