Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn4bQ7M729 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn4bQ7M729 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn4bQ7M729 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn4bQ7M729 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Scn4bQ7M729 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn4bQ7M729 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn4bQ7M729 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn4bQ7M729 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scn4bQ7M729 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn4bQ7M729 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Scn4bQ7M729 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.3■□□□□ 0.68
Scn4bQ7M729 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn4bQ7M729 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn4bQ7M729 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn4bQ7M729 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn4bQ7M729 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn4bQ7M729 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Scn4bQ7M729 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn4bQ7M729 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn4bQ7M729 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn4bQ7M729 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn4bQ7M729 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Scn4bQ7M729 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Scn4bQ7M729 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.28■□□□□ 0.68
Scn4bQ7M729 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn4bQ7M729 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Scn4bQ7M729 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn4bQ7M729 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn4bQ7M729 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn4bQ7M729 Golgb1-201ENSMUST00000023534 498 ntBASIC19.27■□□□□ 0.68
Scn4bQ7M729 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn4bQ7M729 Gm9847-201ENSMUST00000052528 599 ntBASIC19.27■□□□□ 0.68
Scn4bQ7M729 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn4bQ7M729 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Scn4bQ7M729 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn4bQ7M729 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn4bQ7M729 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Scn4bQ7M729 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Scn4bQ7M729 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.26■□□□□ 0.67
Scn4bQ7M729 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.25■□□□□ 0.67
Scn4bQ7M729 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn4bQ7M729 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.24■□□□□ 0.67
Scn4bQ7M729 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.24■□□□□ 0.67
Scn4bQ7M729 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn4bQ7M729 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn4bQ7M729 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Scn4bQ7M729 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.23■□□□□ 0.67
Scn4bQ7M729 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn4bQ7M729 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scn4bQ7M729 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn4bQ7M729 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms