Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.93■■□□□ 1.1
Kdm1aQ6ZQ88 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.93■■□□□ 1.1
Kdm1aQ6ZQ88 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1aQ6ZQ88 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1aQ6ZQ88 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1aQ6ZQ88 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1aQ6ZQ88 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1aQ6ZQ88 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Kdm1aQ6ZQ88 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1aQ6ZQ88 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1aQ6ZQ88 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1aQ6ZQ88 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1aQ6ZQ88 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1aQ6ZQ88 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Kdm1aQ6ZQ88 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1aQ6ZQ88 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.92■■□□□ 1.1
Kdm1aQ6ZQ88 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1aQ6ZQ88 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Kdm1aQ6ZQ88 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Kdm1aQ6ZQ88 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
Kdm1aQ6ZQ88 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Kdm1aQ6ZQ88 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Kdm1aQ6ZQ88 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.91■■□□□ 1.1
Kdm1aQ6ZQ88 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.91■■□□□ 1.1
Kdm1aQ6ZQ88 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Kdm1aQ6ZQ88 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Kdm1aQ6ZQ88 Golph3-202ENSMUST00000226517 2359 ntBASIC21.9■■□□□ 1.1
Kdm1aQ6ZQ88 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.9■■□□□ 1.1
Kdm1aQ6ZQ88 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1aQ6ZQ88 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1aQ6ZQ88 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1aQ6ZQ88 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1aQ6ZQ88 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.9■■□□□ 1.1
Kdm1aQ6ZQ88 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.9■■□□□ 1.1
Kdm1aQ6ZQ88 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1aQ6ZQ88 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Kdm1aQ6ZQ88 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Kdm1aQ6ZQ88 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Kdm1aQ6ZQ88 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Kdm1aQ6ZQ88 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Kdm1aQ6ZQ88 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.89■■□□□ 1.09
Kdm1aQ6ZQ88 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.89■■□□□ 1.09
Kdm1aQ6ZQ88 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Kdm1aQ6ZQ88 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Kdm1aQ6ZQ88 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Kdm1aQ6ZQ88 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Kdm1aQ6ZQ88 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1aQ6ZQ88 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1aQ6ZQ88 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1aQ6ZQ88 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1aQ6ZQ88 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1aQ6ZQ88 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.86■■□□□ 1.09
Kdm1aQ6ZQ88 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1aQ6ZQ88 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.86■■□□□ 1.09
Kdm1aQ6ZQ88 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1aQ6ZQ88 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1aQ6ZQ88 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1aQ6ZQ88 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1aQ6ZQ88 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1aQ6ZQ88 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.85■■□□□ 1.09
Kdm1aQ6ZQ88 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1aQ6ZQ88 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1aQ6ZQ88 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.85■■□□□ 1.09
Kdm1aQ6ZQ88 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1aQ6ZQ88 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1aQ6ZQ88 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.85■■□□□ 1.09
Kdm1aQ6ZQ88 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1aQ6ZQ88 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1aQ6ZQ88 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Kdm1aQ6ZQ88 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Kdm1aQ6ZQ88 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Kdm1aQ6ZQ88 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Kdm1aQ6ZQ88 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Kdm1aQ6ZQ88 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.84■■□□□ 1.09
Kdm1aQ6ZQ88 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Kdm1aQ6ZQ88 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Kdm1aQ6ZQ88 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms