Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Npc1l1Q6T3U4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Npc1l1Q6T3U4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Npc1l1Q6T3U4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Npc1l1Q6T3U4 Gm27405-201ENSMUST00000184201 112 ntBASIC23.89■■□□□ 1.42
Npc1l1Q6T3U4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Npc1l1Q6T3U4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Gm42642-201ENSMUST00000200683 355 ntBASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Npc1l1Q6T3U4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Npc1l1Q6T3U4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Npc1l1Q6T3U4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Npc1l1Q6T3U4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Npc1l1Q6T3U4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Npc1l1Q6T3U4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Npc1l1Q6T3U4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Npc1l1Q6T3U4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Npc1l1Q6T3U4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Npc1l1Q6T3U4 Gm10849-201ENSMUST00000100397 618 ntBASIC23.85■■□□□ 1.41
Npc1l1Q6T3U4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.85■■□□□ 1.41
Npc1l1Q6T3U4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.85■■□□□ 1.41
Npc1l1Q6T3U4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Npc1l1Q6T3U4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Npc1l1Q6T3U4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Npc1l1Q6T3U4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Npc1l1Q6T3U4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Npc1l1Q6T3U4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Npc1l1Q6T3U4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.83■■□□□ 1.41
Npc1l1Q6T3U4 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.83■■□□□ 1.41
Npc1l1Q6T3U4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.83■■□□□ 1.41
Npc1l1Q6T3U4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Npc1l1Q6T3U4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Npc1l1Q6T3U4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.83■■□□□ 1.4
Npc1l1Q6T3U4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Npc1l1Q6T3U4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.83■■□□□ 1.4
Npc1l1Q6T3U4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.83■■□□□ 1.4
Npc1l1Q6T3U4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Npc1l1Q6T3U4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Npc1l1Q6T3U4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Npc1l1Q6T3U4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Npc1l1Q6T3U4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms