Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx58Q6Q899 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx58Q6Q899 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.68■■□□□ 1.54
Ddx58Q6Q899 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC24.68■■□□□ 1.54
Ddx58Q6Q899 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC24.68■■□□□ 1.54
Ddx58Q6Q899 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx58Q6Q899 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Ddx58Q6Q899 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx58Q6Q899 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx58Q6Q899 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx58Q6Q899 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx58Q6Q899 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Ddx58Q6Q899 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx58Q6Q899 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx58Q6Q899 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC24.66■■□□□ 1.54
Ddx58Q6Q899 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.66■■□□□ 1.54
Ddx58Q6Q899 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx58Q6Q899 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx58Q6Q899 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx58Q6Q899 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.65■■□□□ 1.54
Ddx58Q6Q899 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Ddx58Q6Q899 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx58Q6Q899 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx58Q6Q899 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx58Q6Q899 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx58Q6Q899 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Ddx58Q6Q899 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx58Q6Q899 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ddx58Q6Q899 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Ddx58Q6Q899 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ddx58Q6Q899 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ddx58Q6Q899 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx58Q6Q899 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC24.63■■□□□ 1.53
Ddx58Q6Q899 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Ddx58Q6Q899 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC24.63■■□□□ 1.53
Ddx58Q6Q899 Gm42642-201ENSMUST00000200683 355 ntBASIC24.63■■□□□ 1.53
Ddx58Q6Q899 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.62■■□□□ 1.53
Ddx58Q6Q899 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC24.62■■□□□ 1.53
Ddx58Q6Q899 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx58Q6Q899 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx58Q6Q899 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.62■■□□□ 1.53
Ddx58Q6Q899 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx58Q6Q899 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Gm26571-201ENSMUST00000181399 666 ntBASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx58Q6Q899 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx58Q6Q899 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx58Q6Q899 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Ddx58Q6Q899 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx58Q6Q899 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx58Q6Q899 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx58Q6Q899 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx58Q6Q899 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx58Q6Q899 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx58Q6Q899 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx58Q6Q899 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx58Q6Q899 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx58Q6Q899 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx58Q6Q899 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx58Q6Q899 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ddx58Q6Q899 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ddx58Q6Q899 Snhg20-203ENSMUST00000182811 2153 ntBASIC24.57■■□□□ 1.52
Ddx58Q6Q899 Gm10849-201ENSMUST00000100397 618 ntBASIC24.57■■□□□ 1.52
Ddx58Q6Q899 Gm27801-201ENSMUST00000184174 223 ntBASIC24.57■■□□□ 1.52
Ddx58Q6Q899 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx58Q6Q899 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.57■■□□□ 1.52
Ddx58Q6Q899 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx58Q6Q899 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx58Q6Q899 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx58Q6Q899 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx58Q6Q899 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.56■■□□□ 1.52
Ddx58Q6Q899 Gm37035-201ENSMUST00000194809 2148 ntBASIC24.56■■□□□ 1.52
Ddx58Q6Q899 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.56■■□□□ 1.52
Ddx58Q6Q899 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC24.56■■□□□ 1.52
Ddx58Q6Q899 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx58Q6Q899 Gm14281-201ENSMUST00000121700 1294 ntBASIC24.56■■□□□ 1.52
Ddx58Q6Q899 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx58Q6Q899 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx58Q6Q899 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx58Q6Q899 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx58Q6Q899 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx58Q6Q899 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx58Q6Q899 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx58Q6Q899 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx58Q6Q899 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC24.54■■□□□ 1.52
Ddx58Q6Q899 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC24.54■■□□□ 1.52
Ddx58Q6Q899 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms