Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scaf4Q6PFF0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf4Q6PFF0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf4Q6PFF0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.56■□□□□ 0.72
Scaf4Q6PFF0 Gm7143-201ENSMUST00000222811 859 ntBASIC19.56■□□□□ 0.72
Scaf4Q6PFF0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Scaf4Q6PFF0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf4Q6PFF0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf4Q6PFF0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scaf4Q6PFF0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf4Q6PFF0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Scaf4Q6PFF0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf4Q6PFF0 Gm13238-201ENSMUST00000117655 780 ntBASIC19.54■□□□□ 0.72
Scaf4Q6PFF0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf4Q6PFF0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf4Q6PFF0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Scaf4Q6PFF0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf4Q6PFF0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf4Q6PFF0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.52■□□□□ 0.72
Scaf4Q6PFF0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf4Q6PFF0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf4Q6PFF0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.52■□□□□ 0.72
Scaf4Q6PFF0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.52■□□□□ 0.71
Scaf4Q6PFF0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scaf4Q6PFF0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Scaf4Q6PFF0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf4Q6PFF0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf4Q6PFF0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Scaf4Q6PFF0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf4Q6PFF0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf4Q6PFF0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf4Q6PFF0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.51■□□□□ 0.71
Scaf4Q6PFF0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.5■□□□□ 0.71
Scaf4Q6PFF0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Scaf4Q6PFF0 Golph3-205ENSMUST00000228671 2842 ntBASIC19.48■□□□□ 0.71
Scaf4Q6PFF0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf4Q6PFF0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.48■□□□□ 0.71
Scaf4Q6PFF0 Gm43566-201ENSMUST00000196851 808 ntBASIC19.48■□□□□ 0.71
Scaf4Q6PFF0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Scaf4Q6PFF0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf4Q6PFF0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf4Q6PFF0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms