Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Nup98Q6PFD9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.81■■□□□ 1.4
Nup98Q6PFD9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
Nup98Q6PFD9 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.81■■□□□ 1.4
Nup98Q6PFD9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nup98Q6PFD9 Gm9988-201ENSMUST00000069786 435 ntBASIC23.8■■□□□ 1.4
Nup98Q6PFD9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nup98Q6PFD9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nup98Q6PFD9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.8■■□□□ 1.4
Nup98Q6PFD9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nup98Q6PFD9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nup98Q6PFD9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nup98Q6PFD9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.77■■□□□ 1.4
Nup98Q6PFD9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nup98Q6PFD9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC23.77■■□□□ 1.4
Nup98Q6PFD9 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.77■■□□□ 1.4
Nup98Q6PFD9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nup98Q6PFD9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nup98Q6PFD9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nup98Q6PFD9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nup98Q6PFD9 Gm42778-201ENSMUST00000199644 553 ntBASIC23.77■■□□□ 1.4
Nup98Q6PFD9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.77■■□□□ 1.4
Nup98Q6PFD9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nup98Q6PFD9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nup98Q6PFD9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.76■■□□□ 1.39
Nup98Q6PFD9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nup98Q6PFD9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nup98Q6PFD9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nup98Q6PFD9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
Nup98Q6PFD9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Nup98Q6PFD9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nup98Q6PFD9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nup98Q6PFD9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nup98Q6PFD9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Nup98Q6PFD9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nup98Q6PFD9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nup98Q6PFD9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nup98Q6PFD9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nup98Q6PFD9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.74■■□□□ 1.39
Nup98Q6PFD9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nup98Q6PFD9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nup98Q6PFD9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Nup98Q6PFD9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup98Q6PFD9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.72■■□□□ 1.39
Nup98Q6PFD9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nup98Q6PFD9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.72■■□□□ 1.39
Nup98Q6PFD9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Nup98Q6PFD9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.72■■□□□ 1.39
Nup98Q6PFD9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Nup98Q6PFD9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nup98Q6PFD9 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.71■■□□□ 1.39
Nup98Q6PFD9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Nup98Q6PFD9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
Nup98Q6PFD9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nup98Q6PFD9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Nup98Q6PFD9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.7■■□□□ 1.39
Nup98Q6PFD9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
Nup98Q6PFD9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.7■■□□□ 1.39
Nup98Q6PFD9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.7■■□□□ 1.39
Nup98Q6PFD9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nup98Q6PFD9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nup98Q6PFD9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nup98Q6PFD9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Nup98Q6PFD9 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.7■■□□□ 1.38
Nup98Q6PFD9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.7■■□□□ 1.38
Nup98Q6PFD9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nup98Q6PFD9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nup98Q6PFD9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms