Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smarcd1Q61466 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd1Q61466 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd1Q61466 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd1Q61466 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd1Q61466 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd1Q61466 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd1Q61466 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.73■□□□□ 0.91
Smarcd1Q61466 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd1Q61466 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd1Q61466 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd1Q61466 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd1Q61466 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd1Q61466 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
Smarcd1Q61466 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd1Q61466 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Smarcd1Q61466 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd1Q61466 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Smarcd1Q61466 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Smarcd1Q61466 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Smarcd1Q61466 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd1Q61466 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd1Q61466 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd1Q61466 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd1Q61466 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd1Q61466 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd1Q61466 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smarcd1Q61466 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Smarcd1Q61466 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcd1Q61466 Gm40848-201ENSMUST00000221998 324 ntBASIC20.69■□□□□ 0.9
Smarcd1Q61466 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcd1Q61466 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Smarcd1Q61466 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcd1Q61466 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcd1Q61466 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.69■□□□□ 0.9
Smarcd1Q61466 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.69■□□□□ 0.9
Smarcd1Q61466 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcd1Q61466 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcd1Q61466 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcd1Q61466 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcd1Q61466 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Smarcd1Q61466 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Smarcd1Q61466 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcd1Q61466 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcd1Q61466 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.67■□□□□ 0.9
Smarcd1Q61466 Gm11421-201ENSMUST00000122124 294 ntBASIC20.67■□□□□ 0.9
Smarcd1Q61466 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcd1Q61466 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcd1Q61466 Gm43060-201ENSMUST00000200621 289 ntBASIC20.67■□□□□ 0.9
Smarcd1Q61466 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.67■□□□□ 0.9
Smarcd1Q61466 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smarcd1Q61466 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcd1Q61466 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.66■□□□□ 0.9
Smarcd1Q61466 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.66■□□□□ 0.9
Smarcd1Q61466 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcd1Q61466 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcd1Q61466 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Smarcd1Q61466 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smarcd1Q61466 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smarcd1Q61466 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcd1Q61466 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcd1Q61466 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.65■□□□□ 0.9
Smarcd1Q61466 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.65■□□□□ 0.9
Smarcd1Q61466 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Smarcd1Q61466 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
Smarcd1Q61466 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcd1Q61466 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcd1Q61466 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Smarcd1Q61466 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcd1Q61466 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Smarcd1Q61466 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcd1Q61466 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcd1Q61466 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.63■□□□□ 0.89
Smarcd1Q61466 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smarcd1Q61466 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcd1Q61466 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcd1Q61466 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcd1Q61466 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcd1Q61466 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms