Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.71■□□□□ 0.75
Cacna1eQ61290 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.71■□□□□ 0.75
Cacna1eQ61290 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1eQ61290 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cacna1eQ61290 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1eQ61290 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cacna1eQ61290 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1eQ61290 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1eQ61290 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cacna1eQ61290 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1eQ61290 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1eQ61290 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.69■□□□□ 0.74
Cacna1eQ61290 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cacna1eQ61290 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cacna1eQ61290 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1eQ61290 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1eQ61290 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cacna1eQ61290 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1eQ61290 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1eQ61290 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.68■□□□□ 0.74
Cacna1eQ61290 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1eQ61290 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1eQ61290 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cacna1eQ61290 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1eQ61290 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1eQ61290 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cacna1eQ61290 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1eQ61290 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1eQ61290 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1eQ61290 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.67■□□□□ 0.74
Cacna1eQ61290 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1eQ61290 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.67■□□□□ 0.74
Cacna1eQ61290 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cacna1eQ61290 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1eQ61290 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1eQ61290 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1eQ61290 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1eQ61290 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.66■□□□□ 0.74
Cacna1eQ61290 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1eQ61290 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.65■□□□□ 0.74
Cacna1eQ61290 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1eQ61290 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.65■□□□□ 0.74
Cacna1eQ61290 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1eQ61290 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Cacna1eQ61290 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1eQ61290 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1eQ61290 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna1eQ61290 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna1eQ61290 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna1eQ61290 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1eQ61290 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1eQ61290 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1eQ61290 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Cacna1eQ61290 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1eQ61290 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1eQ61290 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1eQ61290 Gm7514-201ENSMUST00000209475 934 ntBASIC19.62■□□□□ 0.73
Cacna1eQ61290 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1eQ61290 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1eQ61290 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1eQ61290 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cacna1eQ61290 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1eQ61290 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.62■□□□□ 0.73
Cacna1eQ61290 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1eQ61290 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1eQ61290 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1eQ61290 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cacna1eQ61290 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1eQ61290 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1eQ61290 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1eQ61290 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cacna1eQ61290 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1eQ61290 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cacna1eQ61290 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1eQ61290 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Cacna1eQ61290 Gm10602-201ENSMUST00000098239 609 ntBASIC19.6■□□□□ 0.73
Cacna1eQ61290 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1eQ61290 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1eQ61290 Gm4968-201ENSMUST00000071458 858 ntBASIC19.6■□□□□ 0.73
Cacna1eQ61290 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1eQ61290 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms