Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sim2Q61079 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.44■□□□□ 0.7
Sim2Q61079 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
Sim2Q61079 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Sim2Q61079 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sim2Q61079 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sim2Q61079 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Sim2Q61079 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Sim2Q61079 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Sim2Q61079 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Gm12527-201ENSMUST00000117967 564 ntBASIC19.43■□□□□ 0.7
Sim2Q61079 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.43■□□□□ 0.7
Sim2Q61079 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sim2Q61079 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sim2Q61079 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sim2Q61079 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sim2Q61079 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sim2Q61079 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.42■□□□□ 0.7
Sim2Q61079 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sim2Q61079 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sim2Q61079 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.41■□□□□ 0.7
Sim2Q61079 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sim2Q61079 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.41■□□□□ 0.7
Sim2Q61079 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.4■□□□□ 0.7
Sim2Q61079 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sim2Q61079 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sim2Q61079 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sim2Q61079 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.4■□□□□ 0.7
Sim2Q61079 Gm5408-201ENSMUST00000197998 747 ntBASIC19.4■□□□□ 0.7
Sim2Q61079 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sim2Q61079 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.4■□□□□ 0.7
Sim2Q61079 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sim2Q61079 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sim2Q61079 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sim2Q61079 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sim2Q61079 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sim2Q61079 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.39■□□□□ 0.69
Sim2Q61079 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.39■□□□□ 0.69
Sim2Q61079 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sim2Q61079 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sim2Q61079 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sim2Q61079 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sim2Q61079 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sim2Q61079 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Sim2Q61079 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sim2Q61079 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sim2Q61079 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.38■□□□□ 0.69
Sim2Q61079 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sim2Q61079 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sim2Q61079 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sim2Q61079 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sim2Q61079 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sim2Q61079 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sim2Q61079 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sim2Q61079 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.37■□□□□ 0.69
Sim2Q61079 Gm13168-201ENSMUST00000121771 632 ntBASIC19.37■□□□□ 0.69
Sim2Q61079 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sim2Q61079 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sim2Q61079 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sim2Q61079 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sim2Q61079 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sim2Q61079 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sim2Q61079 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sim2Q61079 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sim2Q61079 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sim2Q61079 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sim2Q61079 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sim2Q61079 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.36■□□□□ 0.69
Sim2Q61079 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.36■□□□□ 0.69
Sim2Q61079 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sim2Q61079 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Sim2Q61079 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sim2Q61079 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sim2Q61079 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sim2Q61079 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sim2Q61079 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sim2Q61079 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.35■□□□□ 0.69
Sim2Q61079 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.35■□□□□ 0.69
Sim2Q61079 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sim2Q61079 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sim2Q61079 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.35■□□□□ 0.69
Sim2Q61079 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sim2Q61079 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sim2Q61079 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sim2Q61079 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sim2Q61079 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sim2Q61079 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sim2Q61079 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms