Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.38■□□□□ 0.85
Slc6a4Q60857 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Slc6a4Q60857 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Slc6a4Q60857 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Slc6a4Q60857 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a4Q60857 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.38■□□□□ 0.85
Slc6a4Q60857 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.38■□□□□ 0.85
Slc6a4Q60857 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Slc6a4Q60857 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Slc6a4Q60857 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a4Q60857 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Slc6a4Q60857 Gm11421-201ENSMUST00000122124 294 ntBASIC20.37■□□□□ 0.85
Slc6a4Q60857 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a4Q60857 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.37■□□□□ 0.85
Slc6a4Q60857 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.37■□□□□ 0.85
Slc6a4Q60857 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a4Q60857 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a4Q60857 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a4Q60857 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a4Q60857 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.36■□□□□ 0.85
Slc6a4Q60857 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Slc6a4Q60857 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.36■□□□□ 0.85
Slc6a4Q60857 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Slc6a4Q60857 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Slc6a4Q60857 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a4Q60857 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.36■□□□□ 0.85
Slc6a4Q60857 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a4Q60857 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a4Q60857 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a4Q60857 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Slc6a4Q60857 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a4Q60857 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.34■□□□□ 0.85
Slc6a4Q60857 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a4Q60857 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a4Q60857 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a4Q60857 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Slc6a4Q60857 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a4Q60857 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a4Q60857 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a4Q60857 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Slc6a4Q60857 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a4Q60857 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.33■□□□□ 0.85
Slc6a4Q60857 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a4Q60857 Gm5874-201ENSMUST00000096101 508 ntBASIC20.33■□□□□ 0.85
Slc6a4Q60857 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.33■□□□□ 0.85
Slc6a4Q60857 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Slc6a4Q60857 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a4Q60857 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a4Q60857 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a4Q60857 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a4Q60857 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Slc6a4Q60857 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a4Q60857 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a4Q60857 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.32■□□□□ 0.84
Slc6a4Q60857 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a4Q60857 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a4Q60857 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.32■□□□□ 0.84
Slc6a4Q60857 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a4Q60857 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a4Q60857 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a4Q60857 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a4Q60857 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a4Q60857 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a4Q60857 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.31■□□□□ 0.84
Slc6a4Q60857 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a4Q60857 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a4Q60857 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a4Q60857 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a4Q60857 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a4Q60857 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a4Q60857 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a4Q60857 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a4Q60857 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.3■□□□□ 0.84
Slc6a4Q60857 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a4Q60857 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a4Q60857 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Slc6a4Q60857 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.3■□□□□ 0.84
Slc6a4Q60857 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a4Q60857 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a4Q60857 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a4Q60857 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a4Q60857 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a4Q60857 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a4Q60857 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a4Q60857 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a4Q60857 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a4Q60857 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a4Q60857 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms