Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm6365-201ENSMUST00000054711 744 ntBASIC20.02■□□□□ 0.8
Col12a1Q60847 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col12a1Q60847 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.02■□□□□ 0.8
Col12a1Q60847 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col12a1Q60847 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col12a1Q60847 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col12a1Q60847 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col12a1Q60847 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col12a1Q60847 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col12a1Q60847 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Col12a1Q60847 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.01■□□□□ 0.79
Col12a1Q60847 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.01■□□□□ 0.79
Col12a1Q60847 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col12a1Q60847 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col12a1Q60847 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col12a1Q60847 Gm15565-201ENSMUST00000118890 427 ntBASIC20■□□□□ 0.79
Col12a1Q60847 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Col12a1Q60847 Gm7290-201ENSMUST00000104990 617 ntBASIC20■□□□□ 0.79
Col12a1Q60847 Gm12918-201ENSMUST00000120234 636 ntBASIC20■□□□□ 0.79
Col12a1Q60847 Gm15710-201ENSMUST00000121821 636 ntBASIC20■□□□□ 0.79
Col12a1Q60847 Gm5075-201ENSMUST00000196916 622 ntBASIC20■□□□□ 0.79
Col12a1Q60847 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20■□□□□ 0.79
Col12a1Q60847 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20■□□□□ 0.79
Col12a1Q60847 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col12a1Q60847 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col12a1Q60847 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Col12a1Q60847 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col12a1Q60847 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col12a1Q60847 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20■□□□□ 0.79
Col12a1Q60847 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col12a1Q60847 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.99■□□□□ 0.79
Col12a1Q60847 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col12a1Q60847 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col12a1Q60847 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col12a1Q60847 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Col12a1Q60847 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.99■□□□□ 0.79
Col12a1Q60847 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col12a1Q60847 Gm26524-201ENSMUST00000192339 390 ntBASIC19.98■□□□□ 0.79
Col12a1Q60847 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col12a1Q60847 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col12a1Q60847 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col12a1Q60847 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.98■□□□□ 0.79
Col12a1Q60847 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col12a1Q60847 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col12a1Q60847 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col12a1Q60847 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col12a1Q60847 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col12a1Q60847 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col12a1Q60847 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Col12a1Q60847 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col12a1Q60847 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col12a1Q60847 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col12a1Q60847 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.96■□□□□ 0.79
Col12a1Q60847 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.96■□□□□ 0.79
Col12a1Q60847 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col12a1Q60847 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.95■□□□□ 0.78
Col12a1Q60847 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.95■□□□□ 0.78
Col12a1Q60847 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.95■□□□□ 0.78
Col12a1Q60847 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Col12a1Q60847 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col12a1Q60847 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.94■□□□□ 0.78
Col12a1Q60847 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col12a1Q60847 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col12a1Q60847 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col12a1Q60847 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.94■□□□□ 0.78
Col12a1Q60847 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col12a1Q60847 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Col12a1Q60847 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col12a1Q60847 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Col12a1Q60847 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col12a1Q60847 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col12a1Q60847 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col12a1Q60847 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col12a1Q60847 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col12a1Q60847 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col12a1Q60847 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col12a1Q60847 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col12a1Q60847 Gm27275-201ENSMUST00000184318 272 ntBASIC19.92■□□□□ 0.78
Col12a1Q60847 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col12a1Q60847 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col12a1Q60847 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.92■□□□□ 0.78
Col12a1Q60847 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col12a1Q60847 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col12a1Q60847 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col12a1Q60847 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col12a1Q60847 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col12a1Q60847 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col12a1Q60847 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col12a1Q60847 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col12a1Q60847 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col12a1Q60847 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col12a1Q60847 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col12a1Q60847 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col12a1Q60847 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col12a1Q60847 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col12a1Q60847 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col12a1Q60847 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col12a1Q60847 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col12a1Q60847 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Col12a1Q60847 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms