Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Atp13a4Q5XF90 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Atp13a4Q5XF90 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.49■■□□□ 1.03
Atp13a4Q5XF90 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.49■■□□□ 1.03
Atp13a4Q5XF90 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Atp13a4Q5XF90 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atp13a4Q5XF90 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Atp13a4Q5XF90 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.49■■□□□ 1.03
Atp13a4Q5XF90 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
Atp13a4Q5XF90 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atp13a4Q5XF90 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Atp13a4Q5XF90 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Atp13a4Q5XF90 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp13a4Q5XF90 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp13a4Q5XF90 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp13a4Q5XF90 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Atp13a4Q5XF90 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp13a4Q5XF90 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp13a4Q5XF90 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp13a4Q5XF90 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atp13a4Q5XF90 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.46■■□□□ 1.03
Atp13a4Q5XF90 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atp13a4Q5XF90 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.45■■□□□ 1.02
Atp13a4Q5XF90 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Atp13a4Q5XF90 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Atp13a4Q5XF90 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Atp13a4Q5XF90 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atp13a4Q5XF90 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Atp13a4Q5XF90 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atp13a4Q5XF90 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atp13a4Q5XF90 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atp13a4Q5XF90 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 Gm43137-201ENSMUST00000198052 594 ntBASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp13a4Q5XF90 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Atp13a4Q5XF90 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.42■■□□□ 1.02
Atp13a4Q5XF90 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Atp13a4Q5XF90 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Atp13a4Q5XF90 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp13a4Q5XF90 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp13a4Q5XF90 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp13a4Q5XF90 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp13a4Q5XF90 Notumos-201ENSMUST00000151998 2659 ntBASIC21.42■■□□□ 1.02
Atp13a4Q5XF90 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Atp13a4Q5XF90 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Atp13a4Q5XF90 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Atp13a4Q5XF90 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.4■■□□□ 1.02
Atp13a4Q5XF90 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms