Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf43Q5NCP0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf43Q5NCP0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf43Q5NCP0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf43Q5NCP0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf43Q5NCP0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf43Q5NCP0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf43Q5NCP0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf43Q5NCP0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf43Q5NCP0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.24■□□□□ 0.83
Rnf43Q5NCP0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf43Q5NCP0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf43Q5NCP0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf43Q5NCP0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf43Q5NCP0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf43Q5NCP0 Gm13234-201ENSMUST00000120010 747 ntBASIC20.23■□□□□ 0.83
Rnf43Q5NCP0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf43Q5NCP0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.23■□□□□ 0.83
Rnf43Q5NCP0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf43Q5NCP0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf43Q5NCP0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf43Q5NCP0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Rnf43Q5NCP0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf43Q5NCP0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf43Q5NCP0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf43Q5NCP0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf43Q5NCP0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Rnf43Q5NCP0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf43Q5NCP0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Gm9988-201ENSMUST00000069786 435 ntBASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf43Q5NCP0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Rnf43Q5NCP0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf43Q5NCP0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf43Q5NCP0 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.19■□□□□ 0.82
Rnf43Q5NCP0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf43Q5NCP0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf43Q5NCP0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rnf43Q5NCP0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Rnf43Q5NCP0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf43Q5NCP0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Gm27801-201ENSMUST00000184174 223 ntBASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf43Q5NCP0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf43Q5NCP0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf43Q5NCP0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.17■□□□□ 0.82
Rnf43Q5NCP0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Rnf43Q5NCP0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf43Q5NCP0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf43Q5NCP0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf43Q5NCP0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rnf43Q5NCP0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf43Q5NCP0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.16■□□□□ 0.82
Rnf43Q5NCP0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Rnf43Q5NCP0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf43Q5NCP0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf43Q5NCP0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf43Q5NCP0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms