Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rnf20Q5DTM8 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.63■■□□□ 1.37
Rnf20Q5DTM8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rnf20Q5DTM8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf20Q5DTM8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Rnf20Q5DTM8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.62■■□□□ 1.37
Rnf20Q5DTM8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf20Q5DTM8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf20Q5DTM8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf20Q5DTM8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf20Q5DTM8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf20Q5DTM8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Rnf20Q5DTM8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf20Q5DTM8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf20Q5DTM8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf20Q5DTM8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Rnf20Q5DTM8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf20Q5DTM8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf20Q5DTM8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf20Q5DTM8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf20Q5DTM8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf20Q5DTM8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf20Q5DTM8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf20Q5DTM8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Rnf20Q5DTM8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf20Q5DTM8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.59■■□□□ 1.37
Rnf20Q5DTM8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf20Q5DTM8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf20Q5DTM8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.59■■□□□ 1.37
Rnf20Q5DTM8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.58■■□□□ 1.37
Rnf20Q5DTM8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Rnf20Q5DTM8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rnf20Q5DTM8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rnf20Q5DTM8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Rnf20Q5DTM8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Rnf20Q5DTM8 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.58■■□□□ 1.36
Rnf20Q5DTM8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.58■■□□□ 1.36
Rnf20Q5DTM8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf20Q5DTM8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf20Q5DTM8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf20Q5DTM8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf20Q5DTM8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf20Q5DTM8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf20Q5DTM8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf20Q5DTM8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf20Q5DTM8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf20Q5DTM8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Rnf20Q5DTM8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf20Q5DTM8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Rnf20Q5DTM8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf20Q5DTM8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Rnf20Q5DTM8 Notumos-201ENSMUST00000151998 2659 ntBASIC23.55■■□□□ 1.36
Rnf20Q5DTM8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
Rnf20Q5DTM8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf20Q5DTM8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Rnf20Q5DTM8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf20Q5DTM8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf20Q5DTM8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.54■■□□□ 1.36
Rnf20Q5DTM8 Gm9847-201ENSMUST00000052528 599 ntBASIC23.54■■□□□ 1.36
Rnf20Q5DTM8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf20Q5DTM8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf20Q5DTM8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf20Q5DTM8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf20Q5DTM8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf20Q5DTM8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf20Q5DTM8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.52■■□□□ 1.36
Rnf20Q5DTM8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf20Q5DTM8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.52■■□□□ 1.36
Rnf20Q5DTM8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf20Q5DTM8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf20Q5DTM8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.35
Rnf20Q5DTM8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.35
Rnf20Q5DTM8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf20Q5DTM8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf20Q5DTM8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf20Q5DTM8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf20Q5DTM8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf20Q5DTM8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf20Q5DTM8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms