Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf223Q3UV31 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf223Q3UV31 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rnf223Q3UV31 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf223Q3UV31 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf223Q3UV31 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf223Q3UV31 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf223Q3UV31 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf223Q3UV31 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Rnf223Q3UV31 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf223Q3UV31 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
Rnf223Q3UV31 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rnf223Q3UV31 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.31■□□□□ 0.68
Rnf223Q3UV31 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Rnf223Q3UV31 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf223Q3UV31 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf223Q3UV31 Gm5874-201ENSMUST00000096101 508 ntBASIC19.31■□□□□ 0.68
Rnf223Q3UV31 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf223Q3UV31 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf223Q3UV31 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.3■□□□□ 0.68
Rnf223Q3UV31 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.3■□□□□ 0.68
Rnf223Q3UV31 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf223Q3UV31 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf223Q3UV31 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rnf223Q3UV31 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf223Q3UV31 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf223Q3UV31 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf223Q3UV31 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf223Q3UV31 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf223Q3UV31 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf223Q3UV31 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf223Q3UV31 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf223Q3UV31 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf223Q3UV31 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf223Q3UV31 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf223Q3UV31 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rnf223Q3UV31 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf223Q3UV31 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf223Q3UV31 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf223Q3UV31 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.28■□□□□ 0.68
Rnf223Q3UV31 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf223Q3UV31 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf223Q3UV31 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf223Q3UV31 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf223Q3UV31 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf223Q3UV31 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf223Q3UV31 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf223Q3UV31 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.27■□□□□ 0.67
Rnf223Q3UV31 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf223Q3UV31 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf223Q3UV31 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf223Q3UV31 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.26■□□□□ 0.67
Rnf223Q3UV31 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf223Q3UV31 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf223Q3UV31 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rnf223Q3UV31 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf223Q3UV31 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf223Q3UV31 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.26■□□□□ 0.67
Rnf223Q3UV31 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Gm10493-201ENSMUST00000097270 612 ntBASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf223Q3UV31 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf223Q3UV31 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf223Q3UV31 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf223Q3UV31 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf223Q3UV31 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.24■□□□□ 0.67
Rnf223Q3UV31 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
Rnf223Q3UV31 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf223Q3UV31 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rnf223Q3UV31 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf223Q3UV31 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf223Q3UV31 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms