Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smu1Q3UKJ7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Smu1Q3UKJ7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smu1Q3UKJ7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smu1Q3UKJ7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smu1Q3UKJ7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19■□□□□ 0.63
Smu1Q3UKJ7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19■□□□□ 0.63
Smu1Q3UKJ7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smu1Q3UKJ7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smu1Q3UKJ7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smu1Q3UKJ7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smu1Q3UKJ7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smu1Q3UKJ7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smu1Q3UKJ7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smu1Q3UKJ7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smu1Q3UKJ7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smu1Q3UKJ7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smu1Q3UKJ7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smu1Q3UKJ7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smu1Q3UKJ7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smu1Q3UKJ7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smu1Q3UKJ7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.98■□□□□ 0.63
Smu1Q3UKJ7 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.98■□□□□ 0.63
Smu1Q3UKJ7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.98■□□□□ 0.63
Smu1Q3UKJ7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smu1Q3UKJ7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smu1Q3UKJ7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.98■□□□□ 0.63
Smu1Q3UKJ7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Smu1Q3UKJ7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smu1Q3UKJ7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smu1Q3UKJ7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smu1Q3UKJ7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.97■□□□□ 0.63
Smu1Q3UKJ7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smu1Q3UKJ7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.97■□□□□ 0.63
Smu1Q3UKJ7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smu1Q3UKJ7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smu1Q3UKJ7 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.96■□□□□ 0.63
Smu1Q3UKJ7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smu1Q3UKJ7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Smu1Q3UKJ7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.96■□□□□ 0.63
Smu1Q3UKJ7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smu1Q3UKJ7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smu1Q3UKJ7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smu1Q3UKJ7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smu1Q3UKJ7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smu1Q3UKJ7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Smu1Q3UKJ7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.95■□□□□ 0.62
Smu1Q3UKJ7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smu1Q3UKJ7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Smu1Q3UKJ7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smu1Q3UKJ7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
Smu1Q3UKJ7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smu1Q3UKJ7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smu1Q3UKJ7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smu1Q3UKJ7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smu1Q3UKJ7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smu1Q3UKJ7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smu1Q3UKJ7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.94■□□□□ 0.62
Smu1Q3UKJ7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smu1Q3UKJ7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smu1Q3UKJ7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smu1Q3UKJ7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Gm7417-201ENSMUST00000192950 473 ntBASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smu1Q3UKJ7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.92■□□□□ 0.62
Smu1Q3UKJ7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smu1Q3UKJ7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smu1Q3UKJ7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smu1Q3UKJ7 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.91■□□□□ 0.62
Smu1Q3UKJ7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smu1Q3UKJ7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smu1Q3UKJ7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smu1Q3UKJ7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smu1Q3UKJ7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smu1Q3UKJ7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smu1Q3UKJ7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smu1Q3UKJ7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.91■□□□□ 0.62
Smu1Q3UKJ7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smu1Q3UKJ7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms