Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc28Q3TX51 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lrrc28Q3TX51 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.81■□□□□ 0.6
Lrrc28Q3TX51 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lrrc28Q3TX51 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lrrc28Q3TX51 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc28Q3TX51 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc28Q3TX51 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc28Q3TX51 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc28Q3TX51 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.81■□□□□ 0.6
Lrrc28Q3TX51 Gm10493-201ENSMUST00000097270 612 ntBASIC18.81■□□□□ 0.6
Lrrc28Q3TX51 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc28Q3TX51 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc28Q3TX51 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc28Q3TX51 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc28Q3TX51 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc28Q3TX51 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc28Q3TX51 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc28Q3TX51 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc28Q3TX51 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc28Q3TX51 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc28Q3TX51 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.78■□□□□ 0.6
Lrrc28Q3TX51 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.78■□□□□ 0.6
Lrrc28Q3TX51 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.78■□□□□ 0.6
Lrrc28Q3TX51 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc28Q3TX51 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Lrrc28Q3TX51 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
Lrrc28Q3TX51 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.77■□□□□ 0.6
Lrrc28Q3TX51 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Lrrc28Q3TX51 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc28Q3TX51 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lrrc28Q3TX51 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 Gm11421-201ENSMUST00000122124 294 ntBASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc28Q3TX51 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc28Q3TX51 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.74■□□□□ 0.59
Lrrc28Q3TX51 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc28Q3TX51 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lrrc28Q3TX51 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.74■□□□□ 0.59
Lrrc28Q3TX51 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc28Q3TX51 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc28Q3TX51 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc28Q3TX51 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc28Q3TX51 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc28Q3TX51 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc28Q3TX51 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.73■□□□□ 0.59
Lrrc28Q3TX51 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc28Q3TX51 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc28Q3TX51 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc28Q3TX51 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc28Q3TX51 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc28Q3TX51 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.72■□□□□ 0.59
Lrrc28Q3TX51 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms