Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc4Q3TR08 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc4Q3TR08 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc4Q3TR08 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc4Q3TR08 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.79■□□□□ 0.28
Fndc4Q3TR08 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.79■□□□□ 0.28
Fndc4Q3TR08 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc4Q3TR08 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc4Q3TR08 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc4Q3TR08 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc4Q3TR08 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.78■□□□□ 0.28
Fndc4Q3TR08 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc4Q3TR08 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc4Q3TR08 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Fndc4Q3TR08 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Fndc4Q3TR08 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc4Q3TR08 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Fndc4Q3TR08 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc4Q3TR08 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc4Q3TR08 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc4Q3TR08 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc4Q3TR08 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc4Q3TR08 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc4Q3TR08 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.77■□□□□ 0.27
Fndc4Q3TR08 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fndc4Q3TR08 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Fndc4Q3TR08 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Gm40881-201ENSMUST00000223397 166 ntBASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fndc4Q3TR08 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fndc4Q3TR08 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fndc4Q3TR08 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.73■□□□□ 0.27
Fndc4Q3TR08 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fndc4Q3TR08 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fndc4Q3TR08 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.73■□□□□ 0.27
Fndc4Q3TR08 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fndc4Q3TR08 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fndc4Q3TR08 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fndc4Q3TR08 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.73■□□□□ 0.27
Fndc4Q3TR08 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fndc4Q3TR08 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Fndc4Q3TR08 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms