Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim43cP86449 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.65■■□□□ 1.06
Trim43cP86449 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim43cP86449 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim43cP86449 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim43cP86449 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
Trim43cP86449 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim43cP86449 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim43cP86449 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim43cP86449 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.65■■□□□ 1.06
Trim43cP86449 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trim43cP86449 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim43cP86449 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trim43cP86449 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim43cP86449 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim43cP86449 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim43cP86449 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim43cP86449 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim43cP86449 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim43cP86449 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim43cP86449 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim43cP86449 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim43cP86449 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Trim43cP86449 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim43cP86449 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
Trim43cP86449 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim43cP86449 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Trim43cP86449 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim43cP86449 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim43cP86449 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim43cP86449 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.62■■□□□ 1.05
Trim43cP86449 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim43cP86449 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim43cP86449 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.62■■□□□ 1.05
Trim43cP86449 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim43cP86449 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim43cP86449 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Trim43cP86449 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim43cP86449 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.61■■□□□ 1.05
Trim43cP86449 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim43cP86449 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.61■■□□□ 1.05
Trim43cP86449 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim43cP86449 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim43cP86449 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim43cP86449 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim43cP86449 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim43cP86449 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.61■■□□□ 1.05
Trim43cP86449 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim43cP86449 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Trim43cP86449 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.61■■□□□ 1.05
Trim43cP86449 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim43cP86449 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim43cP86449 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim43cP86449 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim43cP86449 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim43cP86449 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim43cP86449 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim43cP86449 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.59■■□□□ 1.05
Trim43cP86449 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Trim43cP86449 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim43cP86449 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Trim43cP86449 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim43cP86449 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Trim43cP86449 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Trim43cP86449 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim43cP86449 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim43cP86449 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim43cP86449 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim43cP86449 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim43cP86449 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim43cP86449 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trim43cP86449 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim43cP86449 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim43cP86449 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim43cP86449 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim43cP86449 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim43cP86449 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim43cP86449 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.57■■□□□ 1.04
Trim43cP86449 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim43cP86449 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trim43cP86449 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim43cP86449 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim43cP86449 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Trim43cP86449 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim43cP86449 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trim43cP86449 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.56■■□□□ 1.04
Trim43cP86449 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim43cP86449 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim43cP86449 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim43cP86449 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Trim43cP86449 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Trim43cP86449 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Trim43cP86449 Gm12251-201ENSMUST00000117893 792 ntBASIC21.56■■□□□ 1.04
Trim43cP86449 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.56■■□□□ 1.04
Trim43cP86449 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim43cP86449 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim43cP86449 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trim43cP86449 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trim43cP86449 Gm43137-201ENSMUST00000198052 594 ntBASIC21.55■■□□□ 1.04
Trim43cP86449 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms