Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.15■□□□□ 0.34
Atf1P81269 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf1P81269 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf1P81269 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atf1P81269 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf1P81269 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Atf1P81269 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf1P81269 Golph3-202ENSMUST00000226517 2359 ntBASIC17.15■□□□□ 0.34
Atf1P81269 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf1P81269 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Atf1P81269 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Atf1P81269 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Atf1P81269 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.14■□□□□ 0.33
Atf1P81269 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.14■□□□□ 0.33
Atf1P81269 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.14■□□□□ 0.33
Atf1P81269 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.14■□□□□ 0.33
Atf1P81269 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Atf1P81269 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf1P81269 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf1P81269 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf1P81269 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf1P81269 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atf1P81269 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf1P81269 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atf1P81269 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf1P81269 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Atf1P81269 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.13■□□□□ 0.33
Atf1P81269 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf1P81269 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atf1P81269 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atf1P81269 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf1P81269 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Atf1P81269 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf1P81269 Gm22238-201ENSMUST00000175222 88 ntBASIC17.12■□□□□ 0.33
Atf1P81269 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Atf1P81269 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf1P81269 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf1P81269 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.11■□□□□ 0.33
Atf1P81269 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.11■□□□□ 0.33
Atf1P81269 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atf1P81269 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atf1P81269 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf1P81269 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf1P81269 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atf1P81269 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.1■□□□□ 0.33
Atf1P81269 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf1P81269 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.1■□□□□ 0.33
Atf1P81269 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf1P81269 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf1P81269 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf1P81269 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.1■□□□□ 0.33
Atf1P81269 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Atf1P81269 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf1P81269 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf1P81269 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atf1P81269 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf1P81269 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf1P81269 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf1P81269 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.09■□□□□ 0.33
Atf1P81269 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf1P81269 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf1P81269 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.09■□□□□ 0.33
Atf1P81269 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.09■□□□□ 0.33
Atf1P81269 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atf1P81269 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atf1P81269 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf1P81269 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf1P81269 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Atf1P81269 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.08■□□□□ 0.33
Atf1P81269 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf1P81269 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf1P81269 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Atf1P81269 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf1P81269 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.08■□□□□ 0.32
Atf1P81269 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf1P81269 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atf1P81269 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf1P81269 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf1P81269 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf1P81269 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf1P81269 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atf1P81269 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf1P81269 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf1P81269 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf1P81269 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf1P81269 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Atf1P81269 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf1P81269 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms