Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.52■□□□□ 0.55
Six5P70178 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Six5P70178 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Six5P70178 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Six5P70178 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six5P70178 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.51■□□□□ 0.55
Six5P70178 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six5P70178 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Six5P70178 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six5P70178 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six5P70178 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six5P70178 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six5P70178 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six5P70178 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six5P70178 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.5■□□□□ 0.55
Six5P70178 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.5■□□□□ 0.55
Six5P70178 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Six5P70178 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six5P70178 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six5P70178 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six5P70178 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Six5P70178 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six5P70178 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Six5P70178 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Six5P70178 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.49■□□□□ 0.55
Six5P70178 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.49■□□□□ 0.55
Six5P70178 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Six5P70178 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six5P70178 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six5P70178 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six5P70178 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six5P70178 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six5P70178 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six5P70178 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Six5P70178 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.48■□□□□ 0.55
Six5P70178 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six5P70178 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six5P70178 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six5P70178 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Six5P70178 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Six5P70178 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Six5P70178 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Six5P70178 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.48■□□□□ 0.55
Six5P70178 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Six5P70178 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Six5P70178 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six5P70178 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six5P70178 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six5P70178 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Six5P70178 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.47■□□□□ 0.55
Six5P70178 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Six5P70178 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six5P70178 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Six5P70178 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Gm12821-201ENSMUST00000120022 600 ntBASIC18.46■□□□□ 0.55
Six5P70178 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
Six5P70178 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six5P70178 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Six5P70178 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Six5P70178 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Six5P70178 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
Six5P70178 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.45■□□□□ 0.54
Six5P70178 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.45■□□□□ 0.54
Six5P70178 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Six5P70178 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.45■□□□□ 0.54
Six5P70178 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Six5P70178 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Six5P70178 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Six5P70178 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms