Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk1P53668 Gm13234-201ENSMUST00000120010 747 ntBASIC19.41■□□□□ 0.7
Limk1P53668 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.41■□□□□ 0.7
Limk1P53668 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.41■□□□□ 0.7
Limk1P53668 Gm8520-201ENSMUST00000186517 868 ntBASIC19.41■□□□□ 0.7
Limk1P53668 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.41■□□□□ 0.7
Limk1P53668 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.41■□□□□ 0.7
Limk1P53668 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.41■□□□□ 0.7
Limk1P53668 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk1P53668 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk1P53668 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Limk1P53668 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk1P53668 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk1P53668 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk1P53668 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Limk1P53668 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Limk1P53668 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limk1P53668 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Limk1P53668 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Limk1P53668 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limk1P53668 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limk1P53668 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Limk1P53668 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limk1P53668 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limk1P53668 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Limk1P53668 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.39■□□□□ 0.69
Limk1P53668 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Limk1P53668 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Limk1P53668 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Limk1P53668 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.39■□□□□ 0.69
Limk1P53668 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.39■□□□□ 0.69
Limk1P53668 Gm4968-201ENSMUST00000071458 858 ntBASIC19.39■□□□□ 0.69
Limk1P53668 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.39■□□□□ 0.69
Limk1P53668 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Limk1P53668 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.39■□□□□ 0.69
Limk1P53668 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Limk1P53668 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Limk1P53668 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Limk1P53668 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Limk1P53668 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Limk1P53668 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Limk1P53668 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Limk1P53668 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Limk1P53668 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Limk1P53668 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Limk1P53668 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Limk1P53668 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.37■□□□□ 0.69
Limk1P53668 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Limk1P53668 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Limk1P53668 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Limk1P53668 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Limk1P53668 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Limk1P53668 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.37■□□□□ 0.69
Limk1P53668 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Limk1P53668 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.37■□□□□ 0.69
Limk1P53668 Mir5133-201ENSMUST00000174955 77 ntBASIC19.37■□□□□ 0.69
Limk1P53668 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Limk1P53668 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Limk1P53668 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.36■□□□□ 0.69
Limk1P53668 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk1P53668 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk1P53668 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Limk1P53668 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Limk1P53668 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk1P53668 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Limk1P53668 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk1P53668 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.35■□□□□ 0.69
Limk1P53668 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.35■□□□□ 0.69
Limk1P53668 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Limk1P53668 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Limk1P53668 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Limk1P53668 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Limk1P53668 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Limk1P53668 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Limk1P53668 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Limk1P53668 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Limk1P53668 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.34■□□□□ 0.69
Limk1P53668 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Limk1P53668 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Limk1P53668 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Limk1P53668 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.33■□□□□ 0.68
Limk1P53668 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Limk1P53668 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Limk1P53668 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
Limk1P53668 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Limk1P53668 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk1P53668 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk1P53668 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk1P53668 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Limk1P53668 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms