Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TubP50586 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.34■□□□□ 0.85
TubP50586 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TubP50586 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TubP50586 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TubP50586 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TubP50586 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TubP50586 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TubP50586 Spcs1-204ENSMUST00000226782 949 ntBASIC20.33■□□□□ 0.85
TubP50586 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TubP50586 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TubP50586 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TubP50586 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TubP50586 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.33■□□□□ 0.84
TubP50586 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
TubP50586 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TubP50586 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TubP50586 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TubP50586 Gm12251-201ENSMUST00000117893 792 ntBASIC20.32■□□□□ 0.84
TubP50586 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TubP50586 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TubP50586 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TubP50586 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TubP50586 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TubP50586 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TubP50586 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TubP50586 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TubP50586 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TubP50586 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TubP50586 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.31■□□□□ 0.84
TubP50586 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.31■□□□□ 0.84
TubP50586 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TubP50586 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TubP50586 Gm6139-201ENSMUST00000079261 882 ntBASIC20.31■□□□□ 0.84
TubP50586 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.31■□□□□ 0.84
TubP50586 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.31■□□□□ 0.84
TubP50586 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TubP50586 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TubP50586 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TubP50586 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.3■□□□□ 0.84
TubP50586 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TubP50586 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TubP50586 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TubP50586 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
TubP50586 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TubP50586 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TubP50586 Gm8493-201ENSMUST00000196881 489 ntBASIC20.3■□□□□ 0.84
TubP50586 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.3■□□□□ 0.84
TubP50586 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TubP50586 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TubP50586 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.3■□□□□ 0.84
TubP50586 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.3■□□□□ 0.84
TubP50586 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TubP50586 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TubP50586 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TubP50586 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TubP50586 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TubP50586 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.29■□□□□ 0.84
TubP50586 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TubP50586 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TubP50586 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TubP50586 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.29■□□□□ 0.84
TubP50586 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TubP50586 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TubP50586 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TubP50586 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TubP50586 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TubP50586 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TubP50586 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TubP50586 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.28■□□□□ 0.84
TubP50586 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TubP50586 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TubP50586 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TubP50586 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TubP50586 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.27■□□□□ 0.84
TubP50586 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TubP50586 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TubP50586 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TubP50586 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TubP50586 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.27■□□□□ 0.84
TubP50586 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TubP50586 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.27■□□□□ 0.84
TubP50586 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TubP50586 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TubP50586 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TubP50586 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TubP50586 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TubP50586 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
TubP50586 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TubP50586 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TubP50586 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TubP50586 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TubP50586 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TubP50586 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TubP50586 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TubP50586 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TubP50586 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.26■□□□□ 0.83
TubP50586 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.26■□□□□ 0.83
TubP50586 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TubP50586 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms