Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SftpbP50405 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.25■□□□□ 0.83
SftpbP50405 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.25■□□□□ 0.83
SftpbP50405 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SftpbP50405 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SftpbP50405 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SftpbP50405 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SftpbP50405 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SftpbP50405 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.24■□□□□ 0.83
SftpbP50405 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.24■□□□□ 0.83
SftpbP50405 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.24■□□□□ 0.83
SftpbP50405 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SftpbP50405 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.24■□□□□ 0.83
SftpbP50405 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SftpbP50405 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SftpbP50405 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SftpbP50405 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SftpbP50405 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SftpbP50405 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SftpbP50405 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SftpbP50405 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SftpbP50405 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SftpbP50405 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SftpbP50405 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SftpbP50405 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SftpbP50405 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.22■□□□□ 0.83
SftpbP50405 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SftpbP50405 Gm15820-201ENSMUST00000201566 728 ntBASIC20.22■□□□□ 0.83
SftpbP50405 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SftpbP50405 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SftpbP50405 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.22■□□□□ 0.83
SftpbP50405 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SftpbP50405 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SftpbP50405 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SftpbP50405 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
SftpbP50405 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SftpbP50405 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SftpbP50405 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SftpbP50405 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SftpbP50405 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SftpbP50405 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SftpbP50405 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.2■□□□□ 0.82
SftpbP50405 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SftpbP50405 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
SftpbP50405 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.2■□□□□ 0.82
SftpbP50405 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SftpbP50405 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SftpbP50405 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SftpbP50405 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SftpbP50405 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SftpbP50405 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SftpbP50405 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SftpbP50405 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SftpbP50405 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.19■□□□□ 0.82
SftpbP50405 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SftpbP50405 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SftpbP50405 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SftpbP50405 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
SftpbP50405 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SftpbP50405 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SftpbP50405 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SftpbP50405 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.18■□□□□ 0.82
SftpbP50405 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SftpbP50405 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SftpbP50405 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SftpbP50405 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SftpbP50405 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SftpbP50405 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.17■□□□□ 0.82
SftpbP50405 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.17■□□□□ 0.82
SftpbP50405 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SftpbP50405 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SftpbP50405 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SftpbP50405 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SftpbP50405 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SftpbP50405 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SftpbP50405 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SftpbP50405 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SftpbP50405 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SftpbP50405 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SftpbP50405 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SftpbP50405 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SftpbP50405 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.16■□□□□ 0.82
SftpbP50405 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SftpbP50405 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SftpbP50405 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SftpbP50405 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SftpbP50405 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SftpbP50405 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SftpbP50405 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SftpbP50405 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.15■□□□□ 0.82
SftpbP50405 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SftpbP50405 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SftpbP50405 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SftpbP50405 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SftpbP50405 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SftpbP50405 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SftpbP50405 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SftpbP50405 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SftpbP50405 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
SftpbP50405 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms