Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx2P48379 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx2P48379 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rfx2P48379 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.75■□□□□ 0.91
Rfx2P48379 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Rfx2P48379 Spcs1-204ENSMUST00000226782 949 ntBASIC20.75■□□□□ 0.91
Rfx2P48379 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx2P48379 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx2P48379 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx2P48379 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx2P48379 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx2P48379 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx2P48379 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx2P48379 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx2P48379 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.74■□□□□ 0.91
Rfx2P48379 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx2P48379 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx2P48379 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.74■□□□□ 0.91
Rfx2P48379 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx2P48379 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx2P48379 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx2P48379 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.74■□□□□ 0.91
Rfx2P48379 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.73■□□□□ 0.91
Rfx2P48379 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.73■□□□□ 0.91
Rfx2P48379 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rfx2P48379 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rfx2P48379 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx2P48379 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx2P48379 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx2P48379 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx2P48379 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx2P48379 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx2P48379 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx2P48379 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Gm12251-201ENSMUST00000117893 792 ntBASIC20.72■□□□□ 0.91
Rfx2P48379 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Rfx2P48379 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx2P48379 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.71■□□□□ 0.91
Rfx2P48379 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.71■□□□□ 0.91
Rfx2P48379 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.71■□□□□ 0.91
Rfx2P48379 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.71■□□□□ 0.91
Rfx2P48379 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx2P48379 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rfx2P48379 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx2P48379 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Rfx2P48379 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx2P48379 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rfx2P48379 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx2P48379 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx2P48379 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Rfx2P48379 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx2P48379 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx2P48379 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx2P48379 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.69■□□□□ 0.9
Rfx2P48379 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.69■□□□□ 0.9
Rfx2P48379 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.69■□□□□ 0.9
Rfx2P48379 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx2P48379 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx2P48379 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx2P48379 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx2P48379 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rfx2P48379 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx2P48379 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx2P48379 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx2P48379 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.68■□□□□ 0.9
Rfx2P48379 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx2P48379 Gm26833-201ENSMUST00000180899 440 ntBASIC20.68■□□□□ 0.9
Rfx2P48379 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx2P48379 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx2P48379 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx2P48379 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rfx2P48379 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rfx2P48379 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rfx2P48379 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rfx2P48379 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.67■□□□□ 0.9
Rfx2P48379 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rfx2P48379 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx2P48379 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx2P48379 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms