Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gdf6P43028 Gm26571-201ENSMUST00000181399 666 ntBASIC20.96■□□□□ 0.95
Gdf6P43028 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gdf6P43028 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gdf6P43028 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.96■□□□□ 0.95
Gdf6P43028 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gdf6P43028 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.96■□□□□ 0.95
Gdf6P43028 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gdf6P43028 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gdf6P43028 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gdf6P43028 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gdf6P43028 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gdf6P43028 Gm42642-201ENSMUST00000200683 355 ntBASIC20.95■□□□□ 0.94
Gdf6P43028 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Gdf6P43028 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gdf6P43028 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gdf6P43028 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gdf6P43028 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gdf6P43028 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.94■□□□□ 0.94
Gdf6P43028 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.94■□□□□ 0.94
Gdf6P43028 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gdf6P43028 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gdf6P43028 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.93■□□□□ 0.94
Gdf6P43028 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gdf6P43028 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gdf6P43028 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gdf6P43028 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Gdf6P43028 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gdf6P43028 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gdf6P43028 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Gdf6P43028 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gdf6P43028 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gdf6P43028 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.91■□□□□ 0.94
Gdf6P43028 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.91■□□□□ 0.94
Gdf6P43028 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gdf6P43028 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gdf6P43028 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gdf6P43028 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gdf6P43028 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gdf6P43028 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gdf6P43028 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gdf6P43028 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gdf6P43028 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gdf6P43028 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gdf6P43028 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gdf6P43028 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gdf6P43028 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gdf6P43028 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Gdf6P43028 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.89■□□□□ 0.94
Gdf6P43028 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
Gdf6P43028 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gdf6P43028 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.89■□□□□ 0.93
Gdf6P43028 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gdf6P43028 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gdf6P43028 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gdf6P43028 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.88■□□□□ 0.93
Gdf6P43028 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Gm42569-201ENSMUST00000200539 472 ntBASIC20.88■□□□□ 0.93
Gdf6P43028 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gdf6P43028 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gdf6P43028 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gdf6P43028 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gdf6P43028 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Gdf6P43028 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.87■□□□□ 0.93
Gdf6P43028 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gdf6P43028 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gdf6P43028 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.86■□□□□ 0.93
Gdf6P43028 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gdf6P43028 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gdf6P43028 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gdf6P43028 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gdf6P43028 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gdf6P43028 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gdf6P43028 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gdf6P43028 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gdf6P43028 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.85■□□□□ 0.93
Gdf6P43028 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gdf6P43028 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms