Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HttP42859 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HttP42859 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.7■■□□□ 1.06
HttP42859 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.7■■□□□ 1.06
HttP42859 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HttP42859 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HttP42859 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HttP42859 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HttP42859 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HttP42859 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HttP42859 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HttP42859 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HttP42859 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
HttP42859 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
HttP42859 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HttP42859 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HttP42859 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HttP42859 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HttP42859 Gm6365-201ENSMUST00000054711 744 ntBASIC21.69■■□□□ 1.06
HttP42859 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HttP42859 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
HttP42859 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HttP42859 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HttP42859 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HttP42859 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HttP42859 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.67■■□□□ 1.06
HttP42859 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.67■■□□□ 1.06
HttP42859 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HttP42859 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.67■■□□□ 1.06
HttP42859 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HttP42859 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HttP42859 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HttP42859 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.66■■□□□ 1.06
HttP42859 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HttP42859 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HttP42859 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HttP42859 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HttP42859 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HttP42859 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HttP42859 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HttP42859 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HttP42859 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HttP42859 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HttP42859 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HttP42859 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HttP42859 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HttP42859 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HttP42859 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HttP42859 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HttP42859 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HttP42859 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HttP42859 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HttP42859 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HttP42859 Gm13146-201ENSMUST00000118508 780 ntBASIC21.65■■□□□ 1.06
HttP42859 Gm6211-202ENSMUST00000167849 925 ntBASIC21.65■■□□□ 1.06
HttP42859 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HttP42859 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HttP42859 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HttP42859 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HttP42859 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.64■■□□□ 1.05
HttP42859 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HttP42859 Gm10819-201ENSMUST00000099988 561 ntBASIC21.64■■□□□ 1.05
HttP42859 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HttP42859 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HttP42859 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HttP42859 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HttP42859 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HttP42859 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HttP42859 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HttP42859 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HttP42859 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HttP42859 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HttP42859 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HttP42859 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.62■■□□□ 1.05
HttP42859 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
HttP42859 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HttP42859 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HttP42859 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HttP42859 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HttP42859 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HttP42859 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.61■■□□□ 1.05
HttP42859 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HttP42859 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HttP42859 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
HttP42859 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HttP42859 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
HttP42859 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HttP42859 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.6■■□□□ 1.05
HttP42859 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HttP42859 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms