Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd9P40240 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd9P40240 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cd9P40240 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd9P40240 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cd9P40240 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd9P40240 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd9P40240 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd9P40240 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Cd9P40240 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cd9P40240 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.62■□□□□ 0.73
Cd9P40240 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.62■□□□□ 0.73
Cd9P40240 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd9P40240 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cd9P40240 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd9P40240 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd9P40240 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd9P40240 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd9P40240 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd9P40240 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cd9P40240 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd9P40240 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cd9P40240 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd9P40240 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd9P40240 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.61■□□□□ 0.73
Cd9P40240 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
Cd9P40240 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd9P40240 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd9P40240 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd9P40240 AA386476-201ENSMUST00000098781 1665 ntBASIC19.6■□□□□ 0.73
Cd9P40240 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd9P40240 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd9P40240 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd9P40240 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd9P40240 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.6■□□□□ 0.73
Cd9P40240 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.6■□□□□ 0.73
Cd9P40240 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd9P40240 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cd9P40240 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cd9P40240 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.59■□□□□ 0.73
Cd9P40240 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.59■□□□□ 0.73
Cd9P40240 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cd9P40240 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd9P40240 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cd9P40240 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cd9P40240 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cd9P40240 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cd9P40240 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.58■□□□□ 0.72
Cd9P40240 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd9P40240 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd9P40240 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd9P40240 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Cd9P40240 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd9P40240 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd9P40240 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd9P40240 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Cd9P40240 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd9P40240 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd9P40240 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd9P40240 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cd9P40240 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.57■□□□□ 0.72
Cd9P40240 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cd9P40240 Gm13241-201ENSMUST00000094493 780 ntBASIC19.57■□□□□ 0.72
Cd9P40240 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd9P40240 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd9P40240 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.57■□□□□ 0.72
Cd9P40240 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Cd9P40240 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd9P40240 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cd9P40240 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd9P40240 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd9P40240 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd9P40240 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cd9P40240 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd9P40240 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd9P40240 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd9P40240 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd9P40240 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd9P40240 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd9P40240 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Cd9P40240 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd9P40240 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd9P40240 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.56■□□□□ 0.72
Cd9P40240 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd9P40240 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cd9P40240 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd9P40240 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd9P40240 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd9P40240 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd9P40240 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd9P40240 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd9P40240 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd9P40240 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd9P40240 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.55■□□□□ 0.72
Cd9P40240 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd9P40240 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.54■□□□□ 0.72
Cd9P40240 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd9P40240 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd9P40240 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cd9P40240 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms