Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
HmgclP38060 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.59■□□□□ 0.73
HmgclP38060 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HmgclP38060 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HmgclP38060 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HmgclP38060 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.59■□□□□ 0.73
HmgclP38060 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HmgclP38060 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HmgclP38060 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.58■□□□□ 0.72
HmgclP38060 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.58■□□□□ 0.72
HmgclP38060 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HmgclP38060 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HmgclP38060 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HmgclP38060 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.57■□□□□ 0.72
HmgclP38060 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HmgclP38060 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HmgclP38060 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HmgclP38060 Notumos-201ENSMUST00000151998 2659 ntBASIC19.57■□□□□ 0.72
HmgclP38060 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HmgclP38060 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HmgclP38060 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.57■□□□□ 0.72
HmgclP38060 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HmgclP38060 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HmgclP38060 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HmgclP38060 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HmgclP38060 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HmgclP38060 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HmgclP38060 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HmgclP38060 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HmgclP38060 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HmgclP38060 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HmgclP38060 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.55■□□□□ 0.72
HmgclP38060 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.55■□□□□ 0.72
HmgclP38060 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HmgclP38060 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.54■□□□□ 0.72
HmgclP38060 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HmgclP38060 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HmgclP38060 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HmgclP38060 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HmgclP38060 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HmgclP38060 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HmgclP38060 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HmgclP38060 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HmgclP38060 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HmgclP38060 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HmgclP38060 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HmgclP38060 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.53■□□□□ 0.72
HmgclP38060 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HmgclP38060 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HmgclP38060 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
HmgclP38060 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HmgclP38060 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HmgclP38060 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HmgclP38060 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HmgclP38060 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.52■□□□□ 0.72
HmgclP38060 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HmgclP38060 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
HmgclP38060 Gm43137-201ENSMUST00000198052 594 ntBASIC19.52■□□□□ 0.72
HmgclP38060 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.52■□□□□ 0.72
HmgclP38060 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.52■□□□□ 0.72
HmgclP38060 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
HmgclP38060 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HmgclP38060 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HmgclP38060 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HmgclP38060 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HmgclP38060 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.51■□□□□ 0.71
HmgclP38060 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HmgclP38060 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HmgclP38060 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HmgclP38060 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HmgclP38060 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HmgclP38060 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
HmgclP38060 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HmgclP38060 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
HmgclP38060 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HmgclP38060 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms