Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LdlrP35951 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LdlrP35951 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LdlrP35951 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LdlrP35951 Gm12922-201ENSMUST00000120626 809 ntBASIC19.69■□□□□ 0.74
LdlrP35951 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LdlrP35951 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
LdlrP35951 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LdlrP35951 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LdlrP35951 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LdlrP35951 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LdlrP35951 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LdlrP35951 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LdlrP35951 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LdlrP35951 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LdlrP35951 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.68■□□□□ 0.74
LdlrP35951 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LdlrP35951 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LdlrP35951 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LdlrP35951 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LdlrP35951 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LdlrP35951 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LdlrP35951 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.67■□□□□ 0.74
LdlrP35951 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LdlrP35951 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LdlrP35951 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.67■□□□□ 0.74
LdlrP35951 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LdlrP35951 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LdlrP35951 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LdlrP35951 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
LdlrP35951 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LdlrP35951 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LdlrP35951 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LdlrP35951 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LdlrP35951 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LdlrP35951 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LdlrP35951 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.66■□□□□ 0.74
LdlrP35951 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LdlrP35951 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.66■□□□□ 0.74
LdlrP35951 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LdlrP35951 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LdlrP35951 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LdlrP35951 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.66■□□□□ 0.74
LdlrP35951 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LdlrP35951 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LdlrP35951 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LdlrP35951 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LdlrP35951 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LdlrP35951 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LdlrP35951 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LdlrP35951 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LdlrP35951 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.65■□□□□ 0.74
LdlrP35951 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.65■□□□□ 0.74
LdlrP35951 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LdlrP35951 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.64■□□□□ 0.74
LdlrP35951 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LdlrP35951 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LdlrP35951 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
LdlrP35951 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LdlrP35951 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LdlrP35951 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LdlrP35951 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LdlrP35951 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
LdlrP35951 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.63■□□□□ 0.73
LdlrP35951 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LdlrP35951 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LdlrP35951 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LdlrP35951 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.63■□□□□ 0.73
LdlrP35951 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LdlrP35951 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LdlrP35951 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LdlrP35951 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LdlrP35951 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LdlrP35951 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LdlrP35951 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LdlrP35951 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.62■□□□□ 0.73
LdlrP35951 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LdlrP35951 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LdlrP35951 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LdlrP35951 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.62■□□□□ 0.73
LdlrP35951 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LdlrP35951 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LdlrP35951 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.62■□□□□ 0.73
LdlrP35951 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.62■□□□□ 0.73
LdlrP35951 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LdlrP35951 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.62■□□□□ 0.73
LdlrP35951 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.62■□□□□ 0.73
LdlrP35951 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.62■□□□□ 0.73
LdlrP35951 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LdlrP35951 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LdlrP35951 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.61■□□□□ 0.73
LdlrP35951 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LdlrP35951 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LdlrP35951 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LdlrP35951 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LdlrP35951 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LdlrP35951 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LdlrP35951 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LdlrP35951 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LdlrP35951 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms