Protein–RNA interactions for Protein: P34960

Mmp12, Macrophage metalloelastase, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp12P34960 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp12P34960 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp12P34960 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp12P34960 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp12P34960 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp12P34960 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp12P34960 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp12P34960 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Mmp12P34960 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp12P34960 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp12P34960 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp12P34960 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp12P34960 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.83■□□□□ 0.61
Mmp12P34960 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.83■□□□□ 0.6
Mmp12P34960 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Mmp12P34960 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp12P34960 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp12P34960 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp12P34960 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Mmp12P34960 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp12P34960 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.83■□□□□ 0.6
Mmp12P34960 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp12P34960 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Mmp12P34960 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp12P34960 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.82■□□□□ 0.6
Mmp12P34960 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp12P34960 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp12P34960 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp12P34960 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp12P34960 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.82■□□□□ 0.6
Mmp12P34960 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp12P34960 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.82■□□□□ 0.6
Mmp12P34960 Gm29257-201ENSMUST00000186115 639 ntBASIC18.82■□□□□ 0.6
Mmp12P34960 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.82■□□□□ 0.6
Mmp12P34960 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.82■□□□□ 0.6
Mmp12P34960 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Mmp12P34960 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp12P34960 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp12P34960 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp12P34960 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp12P34960 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp12P34960 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Mmp12P34960 Gm7291-201ENSMUST00000199147 382 ntBASIC18.81■□□□□ 0.6
Mmp12P34960 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp12P34960 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp12P34960 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp12P34960 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp12P34960 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Mmp12P34960 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp12P34960 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp12P34960 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp12P34960 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp12P34960 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp12P34960 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp12P34960 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp12P34960 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp12P34960 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Mmp12P34960 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp12P34960 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Mmp12P34960 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Mmp12P34960 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mmp12P34960 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.79■□□□□ 0.6
Mmp12P34960 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.79■□□□□ 0.6
Mmp12P34960 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.79■□□□□ 0.6
Mmp12P34960 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp12P34960 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp12P34960 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Mmp12P34960 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp12P34960 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.78■□□□□ 0.6
Mmp12P34960 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp12P34960 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp12P34960 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.78■□□□□ 0.6
Mmp12P34960 Smad6-203ENSMUST00000179458 273 ntBASIC18.78■□□□□ 0.6
Mmp12P34960 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Mmp12P34960 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp12P34960 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp12P34960 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp12P34960 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp12P34960 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp12P34960 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp12P34960 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp12P34960 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp12P34960 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.77■□□□□ 0.6
Mmp12P34960 Gm40848-201ENSMUST00000221998 324 ntBASIC18.77■□□□□ 0.6
Mmp12P34960 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp12P34960 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mmp12P34960 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp12P34960 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Mmp12P34960 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms