Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.35■□□□□ 0.53
Tnfrsf1bP25119 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf1bP25119 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf1bP25119 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.33■□□□□ 0.53
Tnfrsf1bP25119 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf1bP25119 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf1bP25119 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.33■□□□□ 0.53
Tnfrsf1bP25119 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tnfrsf1bP25119 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf1bP25119 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Gm12251-201ENSMUST00000117893 792 ntBASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Spcs1-204ENSMUST00000226782 949 ntBASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf1bP25119 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Gm8493-201ENSMUST00000196881 489 ntBASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.31■□□□□ 0.52
Tnfrsf1bP25119 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf1bP25119 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Gm6139-201ENSMUST00000079261 882 ntBASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf1bP25119 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf1bP25119 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms