Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
VimP20152 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
VimP20152 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VimP20152 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
VimP20152 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VimP20152 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
VimP20152 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VimP20152 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VimP20152 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
VimP20152 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
VimP20152 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VimP20152 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VimP20152 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VimP20152 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.1■□□□□ 0.81
VimP20152 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
VimP20152 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
VimP20152 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.1■□□□□ 0.81
VimP20152 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.09■□□□□ 0.81
VimP20152 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.09■□□□□ 0.81
VimP20152 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VimP20152 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.09■□□□□ 0.81
VimP20152 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.09■□□□□ 0.81
VimP20152 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VimP20152 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VimP20152 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VimP20152 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VimP20152 Gm11599-201ENSMUST00000118720 878 ntBASIC20.08■□□□□ 0.81
VimP20152 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VimP20152 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VimP20152 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
VimP20152 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VimP20152 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VimP20152 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VimP20152 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VimP20152 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
VimP20152 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VimP20152 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.07■□□□□ 0.8
VimP20152 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VimP20152 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VimP20152 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VimP20152 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
VimP20152 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VimP20152 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VimP20152 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VimP20152 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VimP20152 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
VimP20152 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
VimP20152 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VimP20152 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VimP20152 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VimP20152 Gm7432-201ENSMUST00000210343 879 ntBASIC20.06■□□□□ 0.8
VimP20152 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VimP20152 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VimP20152 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VimP20152 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VimP20152 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VimP20152 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VimP20152 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.05■□□□□ 0.8
VimP20152 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VimP20152 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VimP20152 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
VimP20152 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VimP20152 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
VimP20152 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
VimP20152 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
VimP20152 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VimP20152 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VimP20152 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VimP20152 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.03■□□□□ 0.8
VimP20152 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VimP20152 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
VimP20152 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VimP20152 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
VimP20152 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VimP20152 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.03■□□□□ 0.8
VimP20152 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VimP20152 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VimP20152 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VimP20152 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VimP20152 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.02■□□□□ 0.8
VimP20152 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.02■□□□□ 0.8
VimP20152 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
VimP20152 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VimP20152 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VimP20152 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VimP20152 Rarb-207ENSMUST00000225921 2756 ntBASIC20.01■□□□□ 0.79
VimP20152 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VimP20152 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VimP20152 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms