Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rb1P13405 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rb1P13405 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rb1P13405 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rb1P13405 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Rb1P13405 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.08■□□□□ 0.8
Rb1P13405 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rb1P13405 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rb1P13405 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rb1P13405 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rb1P13405 Gm26833-201ENSMUST00000180899 440 ntBASIC20.07■□□□□ 0.8
Rb1P13405 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rb1P13405 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rb1P13405 Gm10493-201ENSMUST00000097270 612 ntBASIC20.07■□□□□ 0.8
Rb1P13405 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rb1P13405 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rb1P13405 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rb1P13405 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rb1P13405 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Rb1P13405 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rb1P13405 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rb1P13405 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rb1P13405 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
Rb1P13405 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.06■□□□□ 0.8
Rb1P13405 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
Rb1P13405 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rb1P13405 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rb1P13405 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rb1P13405 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rb1P13405 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rb1P13405 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rb1P13405 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rb1P13405 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rb1P13405 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.05■□□□□ 0.8
Rb1P13405 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rb1P13405 Gm12251-201ENSMUST00000117893 792 ntBASIC20.05■□□□□ 0.8
Rb1P13405 Gm43530-201ENSMUST00000195920 274 ntBASIC20.05■□□□□ 0.8
Rb1P13405 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.05■□□□□ 0.8
Rb1P13405 Spcs1-204ENSMUST00000226782 949 ntBASIC20.05■□□□□ 0.8
Rb1P13405 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rb1P13405 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rb1P13405 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rb1P13405 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Rb1P13405 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rb1P13405 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rb1P13405 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.04■□□□□ 0.8
Rb1P13405 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Rb1P13405 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rb1P13405 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Gm29257-201ENSMUST00000186115 639 ntBASIC20.04■□□□□ 0.8
Rb1P13405 Gm7291-201ENSMUST00000199147 382 ntBASIC20.04■□□□□ 0.8
Rb1P13405 Gm43060-201ENSMUST00000200621 289 ntBASIC20.04■□□□□ 0.8
Rb1P13405 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.04■□□□□ 0.8
Rb1P13405 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.04■□□□□ 0.8
Rb1P13405 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rb1P13405 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.04■□□□□ 0.8
Rb1P13405 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rb1P13405 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rb1P13405 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rb1P13405 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rb1P13405 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.03■□□□□ 0.8
Rb1P13405 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rb1P13405 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rb1P13405 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rb1P13405 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rb1P13405 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rb1P13405 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rb1P13405 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rb1P13405 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
Rb1P13405 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.02■□□□□ 0.79
Rb1P13405 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rb1P13405 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rb1P13405 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Rb1P13405 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rb1P13405 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rb1P13405 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rb1P13405 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.01■□□□□ 0.79
Rb1P13405 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.01■□□□□ 0.79
Rb1P13405 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rb1P13405 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.01■□□□□ 0.79
Rb1P13405 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rb1P13405 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rb1P13405 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Rb1P13405 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rb1P13405 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rb1P13405 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rb1P13405 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rb1P13405 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Rb1P13405 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rb1P13405 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms