Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
PtcraP0C6B2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PtcraP0C6B2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PtcraP0C6B2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtcraP0C6B2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.23■□□□□ 0.35
PtcraP0C6B2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtcraP0C6B2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.23■□□□□ 0.35
PtcraP0C6B2 Gm21956-201ENSMUST00000179946 522 ntBASIC17.23■□□□□ 0.35
PtcraP0C6B2 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.23■□□□□ 0.35
PtcraP0C6B2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtcraP0C6B2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.23■□□□□ 0.35
PtcraP0C6B2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtcraP0C6B2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtcraP0C6B2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PtcraP0C6B2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PtcraP0C6B2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PtcraP0C6B2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PtcraP0C6B2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtcraP0C6B2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PtcraP0C6B2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PtcraP0C6B2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtcraP0C6B2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtcraP0C6B2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtcraP0C6B2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.21■□□□□ 0.35
PtcraP0C6B2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.21■□□□□ 0.35
PtcraP0C6B2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PtcraP0C6B2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PtcraP0C6B2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PtcraP0C6B2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PtcraP0C6B2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PtcraP0C6B2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PtcraP0C6B2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PtcraP0C6B2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PtcraP0C6B2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PtcraP0C6B2 Gm12821-201ENSMUST00000120022 600 ntBASIC17.18■□□□□ 0.34
PtcraP0C6B2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.18■□□□□ 0.34
PtcraP0C6B2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PtcraP0C6B2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PtcraP0C6B2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PtcraP0C6B2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PtcraP0C6B2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.17■□□□□ 0.34
PtcraP0C6B2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PtcraP0C6B2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtcraP0C6B2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PtcraP0C6B2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtcraP0C6B2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtcraP0C6B2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtcraP0C6B2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PtcraP0C6B2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.16■□□□□ 0.34
PtcraP0C6B2 Gm43137-201ENSMUST00000198052 594 ntBASIC17.16■□□□□ 0.34
PtcraP0C6B2 Spcs1-204ENSMUST00000226782 949 ntBASIC17.16■□□□□ 0.34
PtcraP0C6B2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PtcraP0C6B2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms