Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa6P09092 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa6P09092 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa6P09092 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa6P09092 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa6P09092 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa6P09092 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa6P09092 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.03■□□□□ 0.32
Hoxa6P09092 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa6P09092 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.03■□□□□ 0.32
Hoxa6P09092 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa6P09092 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa6P09092 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxa6P09092 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxa6P09092 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.02■□□□□ 0.32
Hoxa6P09092 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.02■□□□□ 0.32
Hoxa6P09092 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxa6P09092 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxa6P09092 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.02■□□□□ 0.32
Hoxa6P09092 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hoxa6P09092 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxa6P09092 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxa6P09092 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxa6P09092 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Hoxa6P09092 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa6P09092 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa6P09092 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa6P09092 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa6P09092 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa6P09092 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa6P09092 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Hoxa6P09092 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.01■□□□□ 0.31
Hoxa6P09092 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa6P09092 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa6P09092 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hoxa6P09092 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17■□□□□ 0.31
Hoxa6P09092 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hoxa6P09092 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa6P09092 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa6P09092 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa6P09092 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa6P09092 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hoxa6P09092 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17■□□□□ 0.31
Hoxa6P09092 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hoxa6P09092 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hoxa6P09092 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hoxa6P09092 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa6P09092 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hoxa6P09092 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxa6P09092 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxa6P09092 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxa6P09092 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
Hoxa6P09092 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxa6P09092 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Hoxa6P09092 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Hoxa6P09092 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa6P09092 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa6P09092 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa6P09092 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa6P09092 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa6P09092 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa6P09092 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa6P09092 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Hoxa6P09092 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hoxa6P09092 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa6P09092 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Hoxa6P09092 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxa6P09092 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxa6P09092 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Hoxa6P09092 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.97■□□□□ 0.31
Hoxa6P09092 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Hoxa6P09092 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Hoxa6P09092 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxa6P09092 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.97■□□□□ 0.31
Hoxa6P09092 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxa6P09092 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxa6P09092 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxa6P09092 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxa6P09092 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxa6P09092 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Hoxa6P09092 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.96■□□□□ 0.31
Hoxa6P09092 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.96■□□□□ 0.31
Hoxa6P09092 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxa6P09092 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxa6P09092 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxa6P09092 Gm11421-201ENSMUST00000122124 294 ntBASIC16.96■□□□□ 0.31
Hoxa6P09092 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.96■□□□□ 0.31
Hoxa6P09092 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.96■□□□□ 0.31
Hoxa6P09092 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxa6P09092 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hoxa6P09092 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hoxa6P09092 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Hoxa6P09092 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hoxa6P09092 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Hoxa6P09092 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxa6P09092 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.95■□□□□ 0.3
Hoxa6P09092 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxa6P09092 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxa6P09092 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxa6P09092 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms