Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sod1P08228 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
Sod1P08228 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sod1P08228 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sod1P08228 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sod1P08228 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.85■□□□□ 0.61
Sod1P08228 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Sod1P08228 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sod1P08228 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sod1P08228 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sod1P08228 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sod1P08228 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sod1P08228 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sod1P08228 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sod1P08228 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sod1P08228 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sod1P08228 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.84■□□□□ 0.61
Sod1P08228 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.84■□□□□ 0.61
Sod1P08228 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sod1P08228 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sod1P08228 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.84■□□□□ 0.61
Sod1P08228 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.84■□□□□ 0.61
Sod1P08228 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sod1P08228 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Sod1P08228 Gm7514-201ENSMUST00000209475 934 ntBASIC18.83■□□□□ 0.6
Sod1P08228 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Sod1P08228 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sod1P08228 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sod1P08228 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sod1P08228 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sod1P08228 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.82■□□□□ 0.6
Sod1P08228 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sod1P08228 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sod1P08228 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sod1P08228 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sod1P08228 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sod1P08228 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sod1P08228 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sod1P08228 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sod1P08228 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sod1P08228 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.81■□□□□ 0.6
Sod1P08228 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sod1P08228 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.81■□□□□ 0.6
Sod1P08228 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sod1P08228 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sod1P08228 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sod1P08228 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sod1P08228 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sod1P08228 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sod1P08228 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sod1P08228 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.8■□□□□ 0.6
Sod1P08228 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.8■□□□□ 0.6
Sod1P08228 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.8■□□□□ 0.6
Sod1P08228 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sod1P08228 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sod1P08228 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sod1P08228 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.79■□□□□ 0.6
Sod1P08228 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sod1P08228 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sod1P08228 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sod1P08228 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sod1P08228 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sod1P08228 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.78■□□□□ 0.6
Sod1P08228 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sod1P08228 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.78■□□□□ 0.6
Sod1P08228 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.78■□□□□ 0.6
Sod1P08228 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sod1P08228 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sod1P08228 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sod1P08228 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sod1P08228 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sod1P08228 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sod1P08228 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sod1P08228 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.77■□□□□ 0.6
Sod1P08228 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sod1P08228 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sod1P08228 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sod1P08228 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sod1P08228 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sod1P08228 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sod1P08228 Gm13146-201ENSMUST00000118508 780 ntBASIC18.76■□□□□ 0.59
Sod1P08228 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.76■□□□□ 0.59
Sod1P08228 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sod1P08228 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sod1P08228 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sod1P08228 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sod1P08228 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sod1P08228 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.75■□□□□ 0.59
Sod1P08228 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sod1P08228 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms