Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.22■□□□□ 0.35
Igh-VJ558P01758 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.22■□□□□ 0.35
Igh-VJ558P01758 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.22■□□□□ 0.35
Igh-VJ558P01758 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igh-VJ558P01758 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igh-VJ558P01758 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igh-VJ558P01758 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Igh-VJ558P01758 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igh-VJ558P01758 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igh-VJ558P01758 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Igh-VJ558P01758 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Igh-VJ558P01758 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.2■□□□□ 0.34
Igh-VJ558P01758 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.2■□□□□ 0.34
Igh-VJ558P01758 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igh-VJ558P01758 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igh-VJ558P01758 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igh-VJ558P01758 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igh-VJ558P01758 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.2■□□□□ 0.34
Igh-VJ558P01758 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igh-VJ558P01758 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igh-VJ558P01758 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Igh-VJ558P01758 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Igh-VJ558P01758 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Igh-VJ558P01758 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.18■□□□□ 0.34
Igh-VJ558P01758 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.18■□□□□ 0.34
Igh-VJ558P01758 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igh-VJ558P01758 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igh-VJ558P01758 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igh-VJ558P01758 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igh-VJ558P01758 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igh-VJ558P01758 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igh-VJ558P01758 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igh-VJ558P01758 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igh-VJ558P01758 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igh-VJ558P01758 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igh-VJ558P01758 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igh-VJ558P01758 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Igh-VJ558P01758 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
Igh-VJ558P01758 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Igh-VJ558P01758 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igh-VJ558P01758 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.13■□□□□ 0.33
Igh-VJ558P01758 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms