Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.53■□□□□ 0.88
Syn1O88935 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syn1O88935 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syn1O88935 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syn1O88935 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Syn1O88935 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syn1O88935 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.53■□□□□ 0.88
Syn1O88935 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syn1O88935 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.53■□□□□ 0.88
Syn1O88935 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syn1O88935 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syn1O88935 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Syn1O88935 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Syn1O88935 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Syn1O88935 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Syn1O88935 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syn1O88935 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.52■□□□□ 0.88
Syn1O88935 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.52■□□□□ 0.88
Syn1O88935 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Syn1O88935 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syn1O88935 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Syn1O88935 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Syn1O88935 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Syn1O88935 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syn1O88935 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Syn1O88935 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syn1O88935 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syn1O88935 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.51■□□□□ 0.87
Syn1O88935 Gm20049-201ENSMUST00000219950 730 ntBASIC20.51■□□□□ 0.87
Syn1O88935 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Syn1O88935 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.51■□□□□ 0.87
Syn1O88935 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syn1O88935 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Syn1O88935 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Syn1O88935 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syn1O88935 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.5■□□□□ 0.87
Syn1O88935 Gm13148-201ENSMUST00000118892 745 ntBASIC20.5■□□□□ 0.87
Syn1O88935 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syn1O88935 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Syn1O88935 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.5■□□□□ 0.87
Syn1O88935 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Syn1O88935 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syn1O88935 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syn1O88935 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Syn1O88935 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.49■□□□□ 0.87
Syn1O88935 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syn1O88935 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Syn1O88935 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syn1O88935 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syn1O88935 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Syn1O88935 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syn1O88935 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Syn1O88935 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.48■□□□□ 0.87
Syn1O88935 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.48■□□□□ 0.87
Syn1O88935 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.48■□□□□ 0.87
Syn1O88935 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syn1O88935 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Syn1O88935 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.47■□□□□ 0.87
Syn1O88935 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syn1O88935 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Syn1O88935 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syn1O88935 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syn1O88935 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syn1O88935 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syn1O88935 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Syn1O88935 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syn1O88935 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syn1O88935 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Syn1O88935 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Syn1O88935 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syn1O88935 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.46■□□□□ 0.87
Syn1O88935 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syn1O88935 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Syn1O88935 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Syn1O88935 Gm37856-201ENSMUST00000191634 999 ntBASIC20.45■□□□□ 0.86
Syn1O88935 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.45■□□□□ 0.86
Syn1O88935 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Syn1O88935 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Syn1O88935 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Syn1O88935 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Syn1O88935 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Syn1O88935 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Syn1O88935 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.44■□□□□ 0.86
Syn1O88935 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Syn1O88935 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Syn1O88935 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Syn1O88935 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Syn1O88935 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syn1O88935 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.43■□□□□ 0.86
Syn1O88935 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syn1O88935 Gm6365-201ENSMUST00000054711 744 ntBASIC20.43■□□□□ 0.86
Syn1O88935 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syn1O88935 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Syn1O88935 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms