Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.47■□□□□ 0.39
CcnkO88874 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.47■□□□□ 0.39
CcnkO88874 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CcnkO88874 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CcnkO88874 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CcnkO88874 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CcnkO88874 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.47■□□□□ 0.39
CcnkO88874 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CcnkO88874 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CcnkO88874 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.47■□□□□ 0.39
CcnkO88874 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CcnkO88874 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CcnkO88874 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.47■□□□□ 0.39
CcnkO88874 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CcnkO88874 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.46■□□□□ 0.39
CcnkO88874 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CcnkO88874 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CcnkO88874 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.46■□□□□ 0.39
CcnkO88874 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.46■□□□□ 0.39
CcnkO88874 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.46■□□□□ 0.39
CcnkO88874 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CcnkO88874 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CcnkO88874 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CcnkO88874 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CcnkO88874 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CcnkO88874 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CcnkO88874 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CcnkO88874 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CcnkO88874 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcnkO88874 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcnkO88874 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcnkO88874 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcnkO88874 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcnkO88874 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcnkO88874 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcnkO88874 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcnkO88874 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CcnkO88874 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.44■□□□□ 0.38
CcnkO88874 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.44■□□□□ 0.38
CcnkO88874 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcnkO88874 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CcnkO88874 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.43■□□□□ 0.38
CcnkO88874 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CcnkO88874 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcnkO88874 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CcnkO88874 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CcnkO88874 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CcnkO88874 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CcnkO88874 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CcnkO88874 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CcnkO88874 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CcnkO88874 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CcnkO88874 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CcnkO88874 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.42■□□□□ 0.38
CcnkO88874 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CcnkO88874 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CcnkO88874 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CcnkO88874 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CcnkO88874 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CcnkO88874 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CcnkO88874 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CcnkO88874 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CcnkO88874 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CcnkO88874 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CcnkO88874 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CcnkO88874 Gm5812-201ENSMUST00000061073 957 ntBASIC17.41■□□□□ 0.38
CcnkO88874 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.41■□□□□ 0.38
CcnkO88874 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CcnkO88874 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CcnkO88874 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.41■□□□□ 0.38
CcnkO88874 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CcnkO88874 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CcnkO88874 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CcnkO88874 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.4■□□□□ 0.38
CcnkO88874 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.4■□□□□ 0.38
CcnkO88874 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CcnkO88874 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CcnkO88874 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CcnkO88874 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CcnkO88874 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms