Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Best1O88870 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Best1O88870 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Best1O88870 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Best1O88870 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.19■□□□□ 0.66
Best1O88870 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Best1O88870 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Best1O88870 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.18■□□□□ 0.66
Best1O88870 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.18■□□□□ 0.66
Best1O88870 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Best1O88870 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.18■□□□□ 0.66
Best1O88870 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Best1O88870 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Best1O88870 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Best1O88870 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.18■□□□□ 0.66
Best1O88870 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Best1O88870 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Best1O88870 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Best1O88870 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Best1O88870 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Best1O88870 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.17■□□□□ 0.66
Best1O88870 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Best1O88870 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.17■□□□□ 0.66
Best1O88870 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Best1O88870 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Best1O88870 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Best1O88870 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Best1O88870 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Best1O88870 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.16■□□□□ 0.66
Best1O88870 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Best1O88870 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Best1O88870 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Best1O88870 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Best1O88870 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Best1O88870 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.15■□□□□ 0.66
Best1O88870 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Best1O88870 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Best1O88870 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Best1O88870 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Best1O88870 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Best1O88870 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.15■□□□□ 0.66
Best1O88870 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Best1O88870 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.15■□□□□ 0.66
Best1O88870 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.14■□□□□ 0.65
Best1O88870 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Best1O88870 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Best1O88870 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Best1O88870 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Best1O88870 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Best1O88870 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Best1O88870 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Best1O88870 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.13■□□□□ 0.65
Best1O88870 Gm27801-201ENSMUST00000184174 223 ntBASIC19.13■□□□□ 0.65
Best1O88870 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Best1O88870 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Best1O88870 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Best1O88870 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Best1O88870 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.13■□□□□ 0.65
Best1O88870 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Best1O88870 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Best1O88870 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Best1O88870 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Best1O88870 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Best1O88870 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Best1O88870 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Best1O88870 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Best1O88870 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Best1O88870 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Best1O88870 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Best1O88870 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Best1O88870 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Best1O88870 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.11■□□□□ 0.65
Best1O88870 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Best1O88870 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Best1O88870 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
Best1O88870 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Best1O88870 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Best1O88870 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Best1O88870 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Best1O88870 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Best1O88870 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Best1O88870 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Best1O88870 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.1■□□□□ 0.65
Best1O88870 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.1■□□□□ 0.65
Best1O88870 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.1■□□□□ 0.65
Best1O88870 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.1■□□□□ 0.65
Best1O88870 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Best1O88870 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Best1O88870 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Best1O88870 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms